AIMC Topic: Machine Learning

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Machine Learnable Fold Space Representation based on Residue Cluster Classes.

Computational biology and chemistry
MOTIVATION: Protein fold space is a conceptual framework where all possible protein folds exist and ideas about protein structure, function and evolution may be analyzed. Classification of protein folds in this space is commonly achieved by using sim...

Fusing Heterogeneous Features From Stacked Sparse Autoencoder for Histopathological Image Analysis.

IEEE journal of biomedical and health informatics
In the analysis of histopathological images, both holistic (e.g., architecture features) and local appearance features demonstrate excellent performance, while their accuracy may vary dramatically when providing different inputs. This motivates us to...

Rediscovery of Good-Turing estimators via Bayesian nonparametrics.

Biometrics
The problem of estimating discovery probabilities originated in the context of statistical ecology, and in recent years it has become popular due to its frequent appearance in challenging applications arising in genetics, bioinformatics, linguistics,...

Machine learning in burn care and research: A systematic review of the literature.

Burns : journal of the International Society for Burn Injuries
BACKGROUND: To date, there are no reviews on machine learning (ML) in burn care. Considering the growth of ML in medicine and the complexities and challenges of burn care, this review specializes on ML applications in burn care. The objective was to ...

Towards dropout training for convolutional neural networks.

Neural networks : the official journal of the International Neural Network Society
Recently, dropout has seen increasing use in deep learning. For deep convolutional neural networks, dropout is known to work well in fully-connected layers. However, its effect in convolutional and pooling layers is still not clear. This paper demons...

Thirty years of artificial intelligence in medicine (AIME) conferences: A review of research themes.

Artificial intelligence in medicine
BACKGROUND: Over the past 30 years, the international conference on Artificial Intelligence in MEdicine (AIME) has been organized at different venues across Europe every 2 years, establishing a forum for scientific exchange and creating an active res...

idDock+: Integrating Machine Learning in Probabilistic Search for Protein-Protein Docking.

Journal of computational biology : a journal of computational molecular cell biology
Predicting the three-dimensional native structures of protein dimers, a problem known as protein-protein docking, is key to understanding molecular interactions. Docking is a computationally challenging problem due to the diversity of interactions an...

Learning the Structure of Biomedical Relationships from Unstructured Text.

PLoS computational biology
The published biomedical research literature encompasses most of our understanding of how drugs interact with gene products to produce physiological responses (phenotypes). Unfortunately, this information is distributed throughout the unstructured te...

Multi-scale deep networks and regression forests for direct bi-ventricular volume estimation.

Medical image analysis
Direct estimation of cardiac ventricular volumes has become increasingly popular and important in cardiac function analysis due to its effectiveness and efficiency by avoiding an intermediate segmentation step. However, existing methods rely on eithe...

Performance comparison of multi-label learning algorithms on clinical data for chronic diseases.

Computers in biology and medicine
We are motivated by the issue of classifying diseases of chronically ill patients to assist physicians in their everyday work. Our goal is to provide a performance comparison of state-of-the-art multi-label learning algorithms for the analysis of mul...