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Natural Language Processing

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Generative language models on nucleotide sequences of human genes.

Scientific reports
Language models, especially transformer-based ones, have achieved colossal success in natural language processing. To be precise, studies like BERT for natural language understanding and works like GPT-3 for natural language generation are very impor...

Using Natural Language Processing (GPT-4) for Computed Tomography Image Analysis of Cerebral Hemorrhages in Radiology: Retrospective Analysis.

Journal of medical Internet research
BACKGROUND: Cerebral hemorrhage is a critical medical condition that necessitates a rapid and precise diagnosis for timely medical intervention, including emergency operation. Computed tomography (CT) is essential for identifying cerebral hemorrhage,...

Processing of Short-Form Content in Clinical Narratives: Systematic Scoping Review.

Journal of medical Internet research
BACKGROUND: Clinical narratives are essential components of electronic health records. The adoption of electronic health records has increased documentation time for hospital staff, leading to the use of abbreviations and acronyms more frequently. Th...

Guide for the application of the data augmentation approach on sets of texts in Spanish for sentiment and emotion analysis.

PloS one
Over the last ten years, social media has become a crucial data source for businesses and researchers, providing a space where people can express their opinions and emotions. To analyze this data and classify emotions and their polarity in texts, nat...

Larger and more instructable language models become less reliable.

Nature
The prevailing methods to make large language models more powerful and amenable have been based on continuous scaling up (that is, increasing their size, data volume and computational resources) and bespoke shaping up (including post-filtering, fine ...

Development and Evaluation of an Automated Protocol Recommendation System for Chest CT Using Natural Language Processing With CLEVER Terminology Word Replacement.

Canadian Association of Radiologists journal = Journal l'Association canadienne des radiologistes
To evaluate the clinical performance of a Protocol Recommendation System (PRS) automatic protocolling of chest CT imaging requests. 322 387 consecutive historical imaging requests for chest CT between 2017 and 2022 were extracted from a radiology i...

Using Natural Language Processing to develop risk-tier specific suicide prediction models for Veterans Affairs patients.

Journal of psychiatric research
Suicide is a leading cause of death. Suicide rates are particularly elevated among Department of Veterans Affairs (VA) patients. While VA has made impactful suicide prevention advances, efforts primarily target high-risk patients with documented suic...

FuseLinker: Leveraging LLM's pre-trained text embeddings and domain knowledge to enhance GNN-based link prediction on biomedical knowledge graphs.

Journal of biomedical informatics
OBJECTIVE: To develop the FuseLinker, a novel link prediction framework for biomedical knowledge graphs (BKGs), which fully exploits the graph's structural, textual and domain knowledge information. We evaluated the utility of FuseLinker in the graph...

Automated System to Capture Patient Symptoms From Multitype Japanese Clinical Texts: Retrospective Study.

JMIR medical informatics
BACKGROUND: Natural language processing (NLP) techniques can be used to analyze large amounts of electronic health record texts, which encompasses various types of patient information such as quality of life, effectiveness of treatments, and adverse ...