AI Medical Compendium Topic:
Software

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Vaxi-DL: A web-based deep learning server to identify potential vaccine candidates.

Computers in biology and medicine
The development of a new vaccine is a challenging exercise involving several steps including computational studies, experimental work, and animal studies followed by clinical studies. To accelerate the process, in silico screening is frequently used ...

BIPSPI+: Mining Type-Specific Datasets of Protein Complexes to Improve Protein Binding Site Prediction.

Journal of molecular biology
Computational approaches for predicting protein-protein interfaces are extremely useful for understanding and modelling the quaternary structure of protein assemblies. In particular, partner-specific binding site prediction methods allow delineating ...

Sources of Risk of AI Systems.

International journal of environmental research and public health
Artificial intelligence can be used to realise new types of protective devices and assistance systems, so their importance for occupational safety and health is continuously increasing. However, established risk mitigation measures in software develo...

Prediction Model of Stress Intensity Factor of Circumferential Through Crack in Elbow Based on Neural Network.

Computational intelligence and neuroscience
Using ANSYS software to establish the finite element model of crack bending tube, the SIF at the tip of the crack is calculated for the difference in the diameter of the pipe, the outer diameter of the elbow, and the bending angle of the bend pipe, a...

THRONE: A New Approach for Accurate Prediction of Human RNA N7-Methylguanosine Sites.

Journal of molecular biology
N-methylguanosine (m7G) is an essential, ubiquitous, and positively charged modification at the 5' cap of eukaryotic mRNA, modulating its export, translation, and splicing processes. Although several machine learning (ML)-based computational predicto...

PlatypOUs-A Mobile Robot Platform and Demonstration Tool Supporting STEM Education.

Sensors (Basel, Switzerland)
Given the rising popularity of robotics, student-driven robot development projects are playing a key role in attracting more people towards engineering and science studies. This article presents the early development process of an open-source mobile ...

Deep Learning-Assisted Peak Curation for Large-Scale LC-MS Metabolomics.

Analytical chemistry
Available automated methods for peak detection in untargeted metabolomics suffer from poor precision. We present NeatMS, which uses machine learning based on a convoluted neural network to reduce the number and fraction of false peaks. NeatMS comes w...

Cell segmentation for immunofluorescence multiplexed images using two-stage domain adaptation and weakly labeled data for pre-training.

Scientific reports
Cellular profiling with multiplexed immunofluorescence (MxIF) images can contribute to a more accurate patient stratification for immunotherapy. Accurate cell segmentation of the MxIF images is an essential step. We propose a deep learning pipeline t...

Identification of Novel Noninvasive Diagnostics Biomarkers in the Parkinson's Diseases and Improving the Disease Classification Using Support Vector Machine.

BioMed research international
BACKGROUND: Parkinson's disease (PD) is a neurological disorder that is marked by the deficit of neurons in the midbrain that changes motor and cognitive function. In the substantia nigra, the selective demise of dopamine-producing neurons was the ma...

Atomistic Simulations for Reactions and Vibrational Spectroscopy in the Era of Machine Learning─

The journal of physical chemistry. B
Atomistic simulations using accurate energy functions can provide molecular-level insight into functional motions of molecules in the gas and in the condensed phase. This Perspective delineates the present status of the field from the efforts of othe...