BACKGROUND: Multi-layer perceptron (MLP) and radial basis function neural networks (RBFNN) have been shown to be effective in genome-enabled prediction. Here, we evaluated and compared the classification performance of an MLP classifier versus that o...
The concept of precision agriculture, which proposes farming management adapted to crop variability, has emerged in recent years. To effectively implement precision agriculture, data must be gathered from the field in an automated manner at minimal c...
International journal of food microbiology
Aug 2, 2025
Aspergillus niger is an important species in the fungal community of many foods and is one of the most significant microorganisms used in biotechnology. Some A. niger strains are capable of producing fumonisin B (FB) under certain conditions, but lit...
MS/MS-based untargeted metabolomics generates complex data, but pathway enrichment analysis is constrained by the low annotation rates of metabolic features. Here, we propose MS2MP, a novel deep learning-based framework for KEGG pathway prediction di...
Seed viability, a key indicator for quality assessment, directly impacts the emergence of field seedlings. The existing nondestructive testing model for maize seed vitality based on naturally aged seeds and predominantly relying on single-modal data ...
Analytical methods : advancing methods and applications
May 29, 2025
Healthy development of the maize seed industry plays a key role in the effective supply of agricultural products and ensures national food security. Thermal damage to seeds significantly affects crop yield, seed vitality and nutritional value, making...
In order to improve the utilization efficiency of corn seeds and meet the demand of single-seed seeding technology in agriculture, this study was conducted to explore the effect of freezing damage detection on the endosperm and embryo sides of single...
Systems biology aims to uncover gene regulatory networks (GRNs) for agricultural traits, but validating them in crops is challenging. We addressed this challenge by learning and validating model-to-crop transcription factor (TF) regulons governing ni...
Classical genomic prediction approaches rely on statistical associations between traits and markers rather than their biological significance. Biologically informed selection of genomic regions can help prioritize polymorphisms by considering underly...
The Plant journal : for cell and molecular biology
Feb 1, 2025
Maize anthers emerge from male-only florets, a process that involves complex genetic programming and is affected by environmental factors. Quantifying anther exertion provides a key indicator of male fertility; however, traditional manual scoring met...
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