AIMC Topic: Algorithms

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A Novel Ensemble Method for Imbalanced Data Learning: Bagging of Extrapolation-SMOTE SVM.

Computational intelligence and neuroscience
Class imbalance ubiquitously exists in real life, which has attracted much interest from various domains. Direct learning from imbalanced dataset may pose unsatisfying results overfocusing on the accuracy of identification and deriving a suboptimal m...

Comprehensible knowledge model creation for cancer treatment decision making.

Computers in biology and medicine
BACKGROUND: A wealth of clinical data exists in clinical documents in the form of electronic health records (EHRs). This data can be used for developing knowledge-based recommendation systems that can assist clinicians in clinical decision making and...

Comparing humans and deep learning performance for grading AMD: A study in using universal deep features and transfer learning for automated AMD analysis.

Computers in biology and medicine
BACKGROUND: When left untreated, age-related macular degeneration (AMD) is the leading cause of vision loss in people over fifty in the US. Currently it is estimated that about eight million US individuals have the intermediate stage of AMD that is o...

Implementing Machine Learning in Radiology Practice and Research.

AJR. American journal of roentgenology
OBJECTIVE: The purposes of this article are to describe concepts that radiologists should understand to evaluate machine learning projects, including common algorithms, supervised as opposed to unsupervised techniques, statistical pitfalls, and data ...

Exploring temporal information in neonatal seizures using a dynamic time warping based SVM kernel.

Computers in biology and medicine
Seizure events in newborns change in frequency, morphology, and propagation. This contextual information is explored at the classifier level in the proposed patient-independent neonatal seizure detection system. The system is based on the combination...

Master-Leader-Slave Cuckoo Search with Parameter Control for ANN Optimization and Its Real-World Application to Water Quality Prediction.

PloS one
Artificial neural networks (ANNs) have been employed to solve a broad variety of tasks. The selection of an ANN model with appropriate weights is important in achieving accurate results. This paper presents an optimization strategy for ANN model sele...

Automated seizure detection using limited-channel EEG and non-linear dimension reduction.

Computers in biology and medicine
Electroencephalography (EEG) is an essential component in evaluation of epilepsy. However, full-channel EEG signals recorded from 18 to 23 electrodes on the scalp is neither wearable nor computationally effective. This paper presents advantages of bo...

Development and empirical user-centered evaluation of semantically-based query recommendation for an electronic health record search engine.

Journal of biomedical informatics
OBJECTIVE: The utility of biomedical information retrieval environments can be severely limited when users lack expertise in constructing effective search queries. To address this issue, we developed a computer-based query recommendation algorithm th...

Classification of sphingosine kinase inhibitors using counter propagation artificial neural networks: A systematic route for designing selective SphK inhibitors.

SAR and QSAR in environmental research
Accurate and robust classification models for describing and predicting the activity of 330 chemicals that are sphingosine kinase 1 (SphK1) and/or sphingosine kinase 2 (SphK2) inhibitors were derived. The classification models developed in this work ...

Sequence-specific bias correction for RNA-seq data using recurrent neural networks.

BMC genomics
BACKGROUND: The recent success of deep learning techniques in machine learning and artificial intelligence has stimulated a great deal of interest among bioinformaticians, who now wish to bring the power of deep learning to bare on a host of bioinfor...