AIMC Topic: Data Compression

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Sparsity-Penalized Stacked Denoising Autoencoders for Imputing Single-Cell RNA-Seq Data.

Genes
Single-cell RNA-seq (scRNA-seq) is quite prevalent in studying transcriptomes, but it suffers from excessive zeros, some of which are true, but others are false. False zeros, which can be seen as missing data, obstruct the downstream analysis of sing...

Multi-way backpropagation for training compact deep neural networks.

Neural networks : the official journal of the International Neural Network Society
Depth is one of the key factors behind the success of convolutional neural networks (CNNs). Since ResNet (He et al., 2016), we are able to train very deep CNNs as the gradient vanishing issue has been largely addressed by the introduction of skip con...

Structured pruning of recurrent neural networks through neuron selection.

Neural networks : the official journal of the International Neural Network Society
Recurrent neural networks (RNNs) have recently achieved remarkable successes in a number of applications. However, the huge sizes and computational burden of these models make it difficult for their deployment on edge devices. A practically effective...

Application of Deep Compression Technique in Spiking Neural Network Chip.

IEEE transactions on biomedical circuits and systems
In this paper, a reconfigurable and scalable spiking neural network processor, containing 192 neurons and 6144 synapses, is developed. By using deep compression technique in spiking neural network chip, the amount of physical synapses can be reduced ...

Breast cancer histopathology image classification through assembling multiple compact CNNs.

BMC medical informatics and decision making
BACKGROUND: Breast cancer causes hundreds of thousands of deaths each year worldwide. The early stage diagnosis and treatment can significantly reduce the mortality rate. However, the traditional manual diagnosis needs intense workload, and diagnosti...

Human mitochondrial genome compression using machine learning techniques.

Human genomics
BACKGROUND: In recent years, with the development of high-throughput genome sequencing technologies, a large amount of genome data has been generated, which has caused widespread concern about data storage and transmission costs. However, how to effe...

Evolutionary Compression of Deep Neural Networks for Biomedical Image Segmentation.

IEEE transactions on neural networks and learning systems
Biomedical image segmentation is lately dominated by deep neural networks (DNNs) due to their surpassing expert-level performance. However, the existing DNN models for biomedical image segmentation are generally highly parameterized, which severely i...

A Fast and Robust Deep Convolutional Neural Networks for Complex Human Activity Recognition Using Smartphone.

Sensors (Basel, Switzerland)
As a significant role in healthcare and sports applications, human activity recognition (HAR) techniques are capable of monitoring humans' daily behavior. It has spurred the demand for intelligent sensors and has been giving rise to the explosive gro...

Region-of-interest undersampled MRI reconstruction: A deep convolutional neural network approach.

Magnetic resonance imaging
Compressive sensing enables fast magnetic resonance imaging (MRI) reconstruction with undersampled k-space data. However, in most existing MRI reconstruction models, the whole MR image is targeted and reconstructed without taking specific tissue regi...

Learning the implicit strain reconstruction in ultrasound elastography using privileged information.

Medical image analysis
Quasi-static ultrasound elastography is an importance imaging technology to assess the conditions of various diseases through reconstructing the tissue strain from radio frequency data. State-of-the-art strain reconstruction techniques suffer from th...