AIMC Topic: Image Processing, Computer-Assisted

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A deep learning approach using synthetic images for segmenting and estimating 3D orientation of nanoparticles in EM images.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Nanoparticles present properties that can be applied to a wide range of fields such as biomedicine, electronics or optics. The type of properties depends on several characteristics, being some of them related with the partic...

Automatic rat brain image segmentation using triple cascaded convolutional neural networks in a clinical PET/MR.

Physics in medicine and biology
The purpose of this work was to develop and evaluate a deep learning approach for automatic rat brain image segmentation of magnetic resonance imaging (MRI) images in a clinical PET/MR, providing a useful tool for analyzing studies of the pathology a...

Interpretation and visualization techniques for deep learning models in medical imaging.

Physics in medicine and biology
Deep learning (DL) approaches to medical image analysis tasks have recently become popular; however, they suffer from a lack of human interpretability critical for both increasing understanding of the methods' operation and enabling clinical translat...

2D to 3D Evolutionary Deep Convolutional Neural Networks for Medical Image Segmentation.

IEEE transactions on medical imaging
Developing a Deep Convolutional Neural Network (DCNN) is a challenging task that involves deep learning with significant effort required to configure the network topology. The design of a 3D DCNN not only requires a good complicated structure but als...

CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.

IEEE transactions on medical imaging
Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are still chall...

A Curvature-Enhanced Random Walker Segmentation Method for Detailed Capture of 3D Cell Surface Membranes.

IEEE transactions on medical imaging
High-resolution 3D microscopy is a fast advancing field and requires new techniques in image analysis to handle these new datasets. In this work, we focus on detailed 3D segmentation of Dictyostelium cells undergoing macropinocytosis captured on an i...

Improved Segmentation of the Intracranial and Ventricular Volumes in Populations with Cerebrovascular Lesions and Atrophy Using 3D CNNs.

Neuroinformatics
Successful segmentation of the total intracranial vault (ICV) and ventricles is of critical importance when studying neurodegeneration through neuroimaging. We present iCVMapper and VentMapper, robust algorithms that use a convolutional neural networ...

Brain tumor segmentation using K-means clustering and deep learning with synthetic data augmentation for classification.

Microscopy research and technique
Image processing plays a major role in neurologists' clinical diagnosis in the medical field. Several types of imagery are used for diagnostics, tumor segmentation, and classification. Magnetic resonance imaging (MRI) is favored among all modalities ...

Deep Learning for Imaging and Detection of Microorganisms.

Trends in microbiology
Despite tremendous recent interest, the application of deep learning in microbiology has still not reached its full potential. To tackle the challenges faced by human-operated microscopy, deep-learning-based methods have been proposed for microscopic...

A survey on incorporating domain knowledge into deep learning for medical image analysis.

Medical image analysis
Although deep learning models like CNNs have achieved great success in medical image analysis, the small size of medical datasets remains a major bottleneck in this area. To address this problem, researchers have started looking for external informat...