IEEE transactions on neural networks and learning systems
Jun 3, 2019
In the postgenome era, many problems in bioinformatics have arisen due to the generation of large amounts of imbalanced data. In particular, the computational classification of precursor microRNA (pre-miRNA) involves a high imbalance in the classes. ...
Plant science : an international journal of experimental plant biology
Apr 4, 2019
Machine learning (ML) is a field of artificial intelligence that has rapidly emerged in molecular biology, thus allowing the exploitation of Big Data concepts in plant genomics. In this context, the main challenges are given in terms of how to analyz...
Machine learning (ML) encompasses statistical methods that learn to identify patterns in complex datasets. Here, I review application areas in plant-pathogen interactions that have recently benefited from ML, such as disease monitoring, the discovery...
In 2014 plant phenotyping research was not benefiting from the machine learning (ML) revolution because appropriate data were lacking. We report the success of the first open-access dataset suitable for ML in image-based plant phenotyping suitable fo...
BACKGROUND: An increasing number of studies reported that exogenous miRNAs (xenomiRs) can be detected in animal bodies, however, some others reported negative results. Some attributed this divergence to the selective absorption of plant-derived xenom...
The Plant journal : for cell and molecular biology
Sep 11, 2018
Direct observation of morphological plant traits is tedious and a bottleneck for high-throughput phenotyping. Hence, interest in image-based analysis is increasing, with the requirement for software that can reliably extract plant traits, such as lea...
Deep learning is a promising technology to accurately select individuals with high phenotypic values based on genotypic data. Genomic selection (GS) is a promising breeding strategy by which the phenotypes of plant individuals are usually predicted b...
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Aug 4, 2018
Key message New fast and accurate method for phasing and imputation of SNP chip genotypes within diploid bi-parental plant populations. This paper presents a new heuristic method for phasing and imputation of genomic data in diploid plant species. Ou...
IEEE/ACM transactions on computational biology and bioinformatics
Jun 19, 2018
An automated plant species identification system could help botanists and layman in identifying plant species rapidly. Deep learning is robust for feature extraction as it is superior in providing deeper information of images. In this research, a new...
International journal of environmental research and public health
Apr 25, 2018
The Yellow River Delta (YRD), located in Yellow River estuary, is characterized by rich ecological system types, and provides habitats or migration stations for wild birds, all of which makes the delta an ecological barrier or ecotone for inland area...
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