AI Medical Compendium Topic

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DTVF: A User-Friendly Tool for Virulence Factor Prediction Based on ProtT5 and Deep Transfer Learning Models.

Genes
Virulencefactors (VFs) are key molecules that enable pathogens to evade the immune systems of the host. These factors are crucial for revealing the pathogenic processes of microbes and drug discovery. Identification of virulence factors in microbes b...

Teaching old docks new tricks with machine learning enhanced ensemble docking.

Scientific reports
We here introduce Ensemble Optimizer (EnOpt), a machine-learning tool to improve the accuracy and interpretability of ensemble virtual screening (VS). Ensemble VS is an established method for predicting protein/small-molecule (ligand) binding. Unlike...

Integrating artificial intelligence (S-Detect software) and contrast-enhanced ultrasound for enhanced diagnosis of thyroid nodules: A comprehensive evaluation study.

Journal of clinical ultrasound : JCU
PURPOSE: This study aims to assess the diagnostic efficacy of Korean Thyroid imaging reporting and data system (K-TIRADS), S-Detect software and contrast-enhanced ultrasound (CEUS) when employed individually, as well as their combined application, fo...

SeqImprove: Machine-Learning-Assisted Curation of Genetic Circuit Sequence Information.

ACS synthetic biology
The progress and utility of synthetic biology is currently hindered by the lengthy process of studying literature and replicating poorly documented work. Reconstruction of crucial design information through post hoc curation is highly noisy and error...

Volume Measurements for Surveillance after Endovascular Aneurysm Repair using Artificial Intelligence.

European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery
OBJECTIVE: Surveillance after endovascular aneurysm repair (EVAR) is suboptimal due to limited compliance and relatively large variability in measurement methods of abdominal aortic aneurysm (AAA) sac size after treatment. Measuring volume offers a m...

Deep integration of low-cost liquid handling robots in an industrial pharmaceutical development environment.

SLAS technology
The pharmaceutical industry is increasingly embracing laboratory automation to enhance experimental efficiency and operational resilience, particularly through the integration of automated liquid handlers (ALHs). This paper explores the integration o...

From code sharing to sharing of implementations: Advancing reproducible AI development for medical imaging through federated testing.

Journal of medical imaging and radiation sciences
BACKGROUND: The reproducibility crisis in AI research remains a significant concern. While code sharing has been acknowledged as a step toward addressing this issue, our focus extends beyond this paradigm. In this work, we explore "federated testing"...

Retrospective validation study of a machine learning-based software for empirical and organism-targeted antibiotic therapy selection.

Antimicrobial agents and chemotherapy
UNLABELLED: Errors in antibiotic prescriptions are frequent, often resulting from the inadequate coverage of the infection-causative microorganism. The efficacy of iAST, a machine-learning-based software offering empirical and organism-targeted antib...

NeuroQuantify - An image analysis software for detection and quantification of neuron cells and neurite lengths using deep learning.

Journal of neuroscience methods
BACKGROUND: The segmentation of cells and neurites in microscopy images of neuronal networks provides valuable quantitative information about neuron growth and neuronal differentiation, including the number of cells, neurites, neurite length and neur...