Breast Cancer

Analysis of Transferred Pre-Trained Deep Convolution Neural Networks in Breast Masses Recognition

Breast cancer detection based on pre-trained convolution neural network (CNN) has gained much interest among other conventional computer-based systems. In the past few years, CNN technology has been the most promising way to find cancer in mammogram scans. In this paper, the effect of layer freezing in a pre-trained CNN is investigated for breast cancer detection by classifying mammogram images ...

Patherea: Cell Detection and Classification for the 2020s

This paper presents a Patherea, a framework for point-based cell detection and classification that provides a complete solution for developing and evaluating state-of-the-art approaches. We introduce a large-scale dataset collected to directly replicate a clinical workflow for Ki-67 proliferation index estimation and use it to develop an efficient point-based approach that directly predicts poin...

Summary of Point Transformer with Federated Learning for Predicting Breast Cancer HER2 Status from Hematoxylin and Eosin-Stained Whole Slide Images

This study introduces a federated learning-based approach to predict HER2 status from hematoxylin and eosin (HE)-stained whole slide images (WSIs), ...

RadField3D: A Data Generator and Data Format for Deep Learning in Radiation-Protection Dosimetry for Medical Applications

In this research work, we present our open-source Geant4-based Monte-Carlo simulation application, called RadField3D, for generating threedimensiona...

Reliable Breast Cancer Molecular Subtype Prediction based on uncertainty-aware Bayesian Deep Learning by Mammography

Breast cancer is a heterogeneous disease with different molecular subtypes, clinical behavior, treatment responses as well as survival outcomes. The...

DLSOM: A Deep learning-based strategy for liver cancer subtyping

Liver cancer is a leading cause of cancer-related mortality worldwide, with its high genetic heterogeneity complicating diagnosis and treatment. Thi...

Kinetic-Diffusion-Rotation Algorithm for Dose Estimation in Electron Beam Therapy

Monte Carlo methods are state-of-the-art when it comes to dosimetric computations in radiotherapy. However, the execution time of these methods suff...

End-to-end Triple-domain PET Enhancement: A Hybrid Denoising-and-reconstruction Framework for Reconstructing Standard-dose PET Images from Low-dose PET Sinograms

As a sensitive functional imaging technique, positron emission tomography (PET) plays a critical role in early disease diagnosis. However, obtaining...

Deep Learning for Longitudinal Gross Tumor Volume Segmentation in MRI-Guided Adaptive Radiotherapy for Head and Neck Cancer

Accurate segmentation of gross tumor volume (GTV) is essential for effective MRI-guided adaptive radiotherapy (MRgART) in head and neck cancer. Howe...

State-of-the-Art Deep Learning CT Reconstruction Algorithms in Abdominal Imaging.

The implementation of deep neural networks has spurred the creation of deep learning reconstruction (DLR) CT algorithms. DLR CT techniques encompass a...

Monitoring Over Time of Pathological Complete Response to Neoadjuvant Chemotherapy in Breast Cancer Patients Through an Ensemble Vision Transformers-Based Model.

BACKGROUND: Morphological and vascular characteristics of breast cancer can change during neoadjuvant chemotherapy (NAC). Dynamic contrast-enhanced ma...

Explainable Machine Learning Predictions for the Benefit From Chemotherapy in Advanced Non-Small Cell Lung Cancer Without Available Targeted Mutations.

BACKGROUND: Non-small cell lung cancer (NSCLC) is a global health challenge. Chemotherapy remains the standard therapy for advanced NSCLC without muta...

Evaluation of machine learning algorithms and computational structural validation of CYP2D6 in predicting the therapeutic response to tamoxifen in breast cancer.

OBJECTIVE: CYP2D6 plays a critical role in metabolizing tamoxifen into its active metabolite, endoxifen, which is crucial for its therapeutic effect i...

Semi-analytical model for the calculation of solar radiation pressure and its effects on a LEO satellite with predicting the change in position vectors using machine learning techniques

The rapid increase in the deployment of Low Earth Orbit (LEO) satellites, catering to diverse applications such as communication, Earth observation,...

NACNet: A Histology Context-aware Transformer Graph Convolution Network for Predicting Treatment Response to Neoadjuvant Chemotherapy in Triple Negative Breast Cancer

Neoadjuvant chemotherapy (NAC) response prediction for triple negative breast cancer (TNBC) patients is a challenging task clinically as it requires...

Equivariant Graph Attention Networks with Structural Motifs for Predicting Cell Line-Specific Synergistic Drug Combinations

Cancer is the second leading cause of death, with chemotherapy as one of the primary forms of treatment. As a result, researchers are turning to dru...

Leveraging Transfer Learning and Multiple Instance Learning for HER2 Automatic Scoring of H\&E Whole Slide Images

Expression of human epidermal growth factor receptor 2 (HER2) is an important biomarker in breast cancer patients who can benefit from cost-effectiv...

PathoGen-X: A Cross-Modal Genomic Feature Trans-Align Network for Enhanced Survival Prediction from Histopathology Images

Accurate survival prediction is essential for personalized cancer treatment. However, genomic data - often a more powerful predictor than pathology ...

Exploring prognostic biomarkers in pathological images of colorectal cancer patients via deep learning.

Hematoxylin and eosin (H&E) whole slide images provide valuable information for predicting prognostic outcomes in colorectal cancer (CRC) patients. Ho...

Revolutionizing Personalized Cancer Vaccines with NEO: Novel Epitope Optimization Using an Aggregated Feed Forward and Recurrent Neural Network with LSTM Architecture

As cancer cases continue to rise, with a 2023 study from Zhejiang and Harvard predicting a 31 percent increase in cases and a 21 percent increase in...