Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Identification of exosome-related genes in NSCLC via integrated bioinformatics and machine learning analysis.

Exosomes are crucial in the development of non-small cell lung cancer (NSCLC), yet exosome-associated genes in NSCLC remain insufficiently explored. The present study identified 59 exosome-associated differentially expressed genes (EA-DEGs) from the Gene Expression Omnibus (GEO) and GeneCards databases. Functional analysis indicated the involvement of the EA-DEGs in NSCLC-related pathways, includi...

Jul 2 2025 40595797

Unveiling diagnostic biomarkers and therapeutic targets in lung adenocarcinoma using bioinformatics and experimental validation.

Lung adenocarcinoma (LUAD) is a major challenge in oncology due to its complex molecular structure and generally poor prognosis. The aim of this study was to find diagnostic markers and therapeutic targets for LUAD by integrating differential gene expression analysis, weighted gene co-expression network analysis (WGCNA), and machine learning methods. Differentially expressed genes (DEGs) were iden...

Jul 2 2025 40595823
A deep learning model for diagnosis of inherited retinal diseases.

To evaluate the performance of a multi-input deep learning (DL) model in detecting two common inherited retinal diseases (IRDs), i.e. retinitis pigmen...

Jul 2 2025 40595896
Cross modality learning of cell painting and transcriptomics data improves mechanism of action clustering and bioactivity modelling.

In drug discovery, different data modalities (chemical structure, cell biology, quantum mechanics, etc.) are abundant, and their integration can help ...

Jul 2 2025 40596104
Gene therapy and genome editing for lipoprotein disorders.

Genetic factors play a critical role in the development of lipoprotein disorders, which significantly contribute to atherosclerotic cardiovascular dis...

Jul 2 2025 40600248
Therapeutic horizons in metabolic dysfunction-associated steatohepatitis.

Metabolic dysfunction-associated steatohepatitis (MASH), the progressive inflammatory form of MASLD, is now a leading cause of chronic liver disease w...

Jul 1 2025 40590228
Regulation and induction of fungal secondary metabolites: a comprehensive review.

Fungal secondary metabolites (SMs) represent a vast reservoir of bioactive compounds with immense therapeutic, agricultural, and industrial potential....

Jul 1 2025 40590991
Identification of key biomarkers and potential therapeutic drugs in nasopharyngeal carcinoma based on comprehensive bioinformatics analysis.

Nasopharyngeal carcinoma (NPC) is the most prevalent type of head- and -neck cancer, and its diagnosis and treatment are currently facing significant ...

Jul 1 2025 40591047
Machine learning reveals genes impacting oxidative stress resistance across yeasts.

Reactive oxygen species (ROS) are highly reactive molecules encountered by yeasts during routine metabolism and during interactions with other organis...

Jul 1 2025 40592811
Prognostic model of lung adenocarcinoma from the perspective of cancer-associated fibroblasts using single-cell and bulk RNA-sequencing.

Cancer-associated fibroblasts (CAFs) play important roles in the progression of lung adenocarcinoma (LUAD). We examined CAF subgroups via gene ontolog...

Jul 1 2025 40592920
Identification of pyroptosis related genes and subtypes in atherosclerosis using multiomic and single cell analysis.

Atherosclerosis (AS), the leading cause of cardiovascular diseases, is a chronic inflammatory disorder involving lipid metabolism, immune dysregulatio...

Jul 1 2025 40592922
Screening biomarkers related to cholesterol metabolism in osteoarthritis based on transcriptomics.

Cholesterol metabolism-related genes (CMRGs) have been associated with osteoarthritis (OA), but their specific regulatory mechanisms remain unclear. T...

Jul 1 2025 40593053
Predicting cisplatin response in cholangiocarcinoma patients using chromosome pattern and related gene expression.

Cholangiocarcinoma (CCA) is a prevalent bile duct cancer with limited treatment options. Cisplatin-based chemotherapy is a common approach, but respon...

Jul 1 2025 40593068
Deep generalizable prediction of RNA secondary structure via base pair motif energy.

Deep learning methods have demonstrated great performance for RNA secondary structure prediction. However, generalizability is a common unsolved issue...

Jul 1 2025 40593483
Data-driven protease engineering by DNA-recording and epistasis-aware machine learning.

Protein engineering has recently seen tremendous transformation due to machine learning (ML) tools that predict structure from sequence at unprecedent...

Jul 1 2025 40593579
Quantifying complexity in DNA structures with high resolution Atomic Force Microscopy.

DNA topology is essential for regulating cellular processes and maintaining genome stability, yet it is challenging to quantify due to the size and co...

Jul 1 2025 40593613
RiNALMo: general-purpose RNA language models can generalize well on structure prediction tasks.

While RNA has recently been recognized as an interesting small-molecule drug target, many challenges remain to be addressed before we take full advant...

Jul 1 2025 40593636
Comprehensive datasets for RNA design, machine learning, and beyond.

RNA molecules are essential in regulating biological processes such as gene expression, cellular differentiation, and development. Accurately predicti...

Jul 1 2025 40594473
Identifying ovarian cancer with machine learning DNA methylation pattern analysis.

The majority of patients with epithelial ovarian cancer (EOC) continue to be diagnosed at an advanced stage despite great advances in this disease tre...

Jul 1 2025 40594531
Deep learning-driven drug response prediction and mechanistic insights in cancer genomics.

In the field of cancer therapy, the diversity and heterogeneity of cancer genomes in clinical patients complicate and challenge the effective use of n...

Jul 1 2025 40595000
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