Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Showing 3281-3300 of 14,214 articles

Machine learning and multi-omics analysis reveal key regulators of proneural-mesenchymal transition in glioblastoma.

Glioblastoma (GBM) is classified into subtypes according to the molecular expression profile; the proneural subtype has a relatively good prognosis, and the mesenchymal type is the most aggressive form with the worst prognosis. GBM undergoes proneural-mesenchymal transition (PMT) during its evolution or in response to changes in the microenvironment or therapeutic interventions. PMT is accompanied...

Jun 5 2025 40473799

Detecting genetic interactions with visible neural networks.

Non-linear interactions among single nucleotide polymorphisms (SNPs), genes, and pathways play an important role in human diseases, but identifying these interactions is a challenging task. Neural networks are state-of-the-art predictors in many domains due to their ability to analyze big data and model complex patterns, including non-linear interactions. In genetics, visible neural networks are p...

Jun 5 2025 40473911
Case-control study combined with machine learning techniques to identify key genetic variations in GSK3B that affect susceptibility to diabetic kidney diseases.

The role of genetic susceptibility in early warning and precise treatment of diabetic kidney disease (DKD) requires further investigation. A case-cont...

Jun 5 2025 40474205
Designing diverse and high-performance proteins with a large language model in the loop.

We present a protein engineering approach to directed evolution with machine learning that integrates a new semi-supervised neural network fitness pre...

Jun 5 2025 40471987
Epistasis regulates genetic control of cardiac hypertrophy.

Although genetic variant effects often interact nonadditively, strategies to uncover epistasis remain in their infancy. Here we develop low-signal sig...

Jun 5 2025 40473955
Multi-omics profiling of cross-resistance between ceftazidime-avibactam and meropenem identifies common and strain-specific mechanisms in clinical isolates.

is a highly versatile and resilient pathogen that can infect different tissues and rapidly develop resistance to multiple drugs. Ceftazidime-avibacta...

Jun 4 2025 40464559
Shining Light on DNA Mutations through Machine Learning-Augmented Vibrational Spectroscopy.

A method to directly predict the number of nucleic acid bases in a single-stranded DNA (ssDNA) or a genomic DNA has been proposed with a combination o...

Jun 4 2025 40462527
GNNMutation: a heterogeneous graph-based framework for cancer detection.

BACKGROUND: When genes are translated into proteins, mutations in the gene sequence can lead to changes in protein structure and function as well as i...

Jun 4 2025 40468240
Phage Ge15, NRG-P0073: Genomic Characterization and Host Range Analysis Against the ECOR Reference Library.

BACKGROUND: Genomic sequencing and annotation, morphological characterization, and host range analyses of bacteriophage (phage) isolates are crucial t...

Jun 4 2025 40535595
Explainable RNA-Small Molecule Binding Affinity Prediction Based on Multiview Enhancement Learning.

RNA has the potential to serve as a drug target, requiring RNA-small molecule binding affinity to screen potential drugs generally. However, accuratel...

Jun 3 2025 40461953
Context-Aware Biosensor Design Through Biology-Guided Machine Learning and Dynamical Modeling.

Addressing the challenge of achieving a global circular bioeconomy requires efficient and robust bio-based processes operating at different scales. Th...

Jun 3 2025 40460061
AI-Driven Biomarker Discovery and Personalized Allergy Treatment: Utilizing Machine Learning and NGS.

PURPOSE OF REVIEW: This review explores the transformative potential of artificial intelligence (AI) and next-generation sequencing (NGS) in allergy d...

Jun 3 2025 40459653
Predicting genetic merit in Harnali sheep using machine learning techniques.

Machine learning techniques offer promising avenues for enhancing animal breeding programs by leveraging genomic and phenotypic data to predict valuab...

Jun 3 2025 40459794
Immuno-transcriptomic analysis based on machine learning identifies immunity signature genes of chronic rhinosinusitis with nasal polyps.

Chronic rhinosinusitis with nasal polyps (CRSwNP) is a prevalent inflammatory disease where immunomodulation plays a pivotal role. However, immuno-tra...

Jun 3 2025 40461517
Prime editor with rational design and AI-driven optimization for reverse editing window and enhanced fidelity.

Prime editing (PE) is a precise tool for introducing genetic mutations in eukaryotes. Extending the efficient editing scope and mitigating undesired b...

Jun 3 2025 40461565
Identifying a gene signature for age-related hearing loss through machine learning and revealing the effect of the CTSS on the mice cochlea.

Age-related hearing loss (ARHL) is one of the most common health conditions among the elderly population. This study used machine learning to screen f...

Jun 3 2025 40461927
Uncertainty Quantification and Temperature Scaling Calibration for Protein-RNA Binding Site Prediction.

The black-box nature of deep learning has increasingly drawn attention to the reliability and uncertainty of predictive models. Currently, several unc...

Jun 2 2025 40455481
Molecular Optimization Based on a Monte Carlo Tree Search and Multiobjective Genetic Algorithm.

In the realm of medicinal chemistry, the predominant challenge in molecular design lies in managing extensive molecular data sets and effectively scre...

Jun 2 2025 40456025
Performance of deep-learning-based approaches to improve polygenic scores.

Polygenic scores, which estimate an individual's genetic propensity for a disease or trait, have the potential to become part of genomic healthcare. N...

Jun 2 2025 40456720
Multi-omics identifies OSM-OSMR as a key receptor-ligand in the tumor environment of endometrial adenocarcinoma.

Endometrial adenocarcinoma carries a bleak prognosis, and the molecular markers that evaluate the progression of endometrial adenocarcinoma to advance...

May 31 2025 40450916
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