Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Predicting Biological Activity from Biosynthetic Gene Clusters Using Neural Networks.

Microorganisms such as bacteria and fungi have been used for natural products that translate to drug...

Jul 2025 40524326
CircFormerMoE: An End-to-End Deep Learning Framework for Circular RNA Splice Site Detection and Pairing in Plant Genomes

Circular RNAs (circRNAs) are important components of the non-coding RNA regulatory network. Previo...

Enhancing Parameter Control Policies with State Information

Parameter control and dynamic algorithm configuration study how to dynamically choose suitable con...

AMRScan: A hybrid R and Nextflow toolkit for rapid antimicrobial resistance gene detection from sequencing data

AMRScan is a hybrid bioinformatics toolkit implemented in both R and [Nextflow](https://www.nextfl...

HybridQC: Machine Learning-Augmented Quality Control for Single-Cell RNA-seq Data

HybridQC is an R package that streamlines quality control (QC) of single-cell RNA sequencing (scRN...

Sparse Autoencoders Reveal Interpretable Structure in Small Gene Language Models

Sparse autoencoders (SAEs) have recently emerged as a powerful tool for interpreting the internal ...

Mix-Geneformer: Unified Representation Learning for Human and Mouse scRNA-seq Data

Single-cell RNA sequencing (scRNA-seq) enables single-cell transcriptomic profiling, revealing cel...

Topological Sequence Analysis of Genomes: Category Approaches

Sequence data, such as DNA, RNA, and protein sequences, exhibit intricate, multi-scale structures ...

A multi-modal dataset for insect biodiversity with imagery and DNA at the trap and individual level

Insects comprise millions of species, many experiencing severe population declines under environme...

EXAONE Path 2.0: Pathology Foundation Model with End-to-End Supervision

In digital pathology, whole-slide images (WSIs) are often difficult to handle due to their gigapix...

Expanding biobank pharmacogenomics through machine learning calls of structural variation.

Biobanks linking genetic data with clinical health records provide exciting opportunities for pharma...

Jul 2025 40344017
Predicting rare DNA conformations via dynamical graphical models: a case study of the B→A transition.

DNA exhibits local conformational preferences that affect its ability to adopt biologically relevant...

Jul 2025 40626554
Multi-Disease Deep Learning Framework for GWAS: Beyond Feature Selection Constraints

Traditional GWAS has advanced our understanding of complex diseases but often misses nonlinear gen...

Bridging KAN and MLP: MJKAN, a Hybrid Architecture with Both Efficiency and Expressiveness

Kolmogorov-Arnold Networks (KANs) have garnered attention for replacing fixed activation functions...

Deep learning analyses of splicing variants identify the link of PCP4 with amyotrophic lateral sclerosis.

Amyotrophic lateral sclerosis (ALS) is a severe motor neuron disease, with most sporadic cases lacki...

Jul 2025 39852553
StructMAn 2.0 Web: a web server for structural annotation of protein sequences and mutations.

StructMAn is a method for protein structural annotation. It describes each position of a protein seq...

Jul 2025 40326516
HawkDock version 2: an updated web server to predict and analyze the structures of protein-protein complexes.

Protein-protein interactions (PPIs) are fundamental to cellular functions, yet predicting and analyz...

Jul 2025 40326522
AIoptamer: Artificial Intelligence-Driven Aptamer Optimization Pipeline for Targeted Therapeutics in Healthcare.

Aptamers are short, single-stranded DNA or RNA molecules known for their high specificity and affini...

Jul 2025 40531093
CGeNArateWeb: a web server for the atomistic study of the structure and dynamics of chromatin fibers.

We present CGeNArateWeb, a new web tool for the three-dimensional simulation of naked DNA and protei...

Jul 2025 40347109
Leveraging infrared spectroscopy for cocoa content prediction: A dual approach with Kohonen neural network and multivariate modeling.

People of all ages enjoy chocolate, and its popularity is attributed to its pleasant taste and aroma...

Jul 2025 40037265
Beyond Olfaction: New Insights into Human Odorant Binding Proteins

Until today, the exact function of mammalian odorant binding proteins (OBPs) remains a topic of de...

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