Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Genomic Prediction for Quantitative Traits Is Improved by Mapping Variants to Gene Ontology Categories in Drosophila melanogaster.

Predicting individual quantitative trait phenotypes from high-resolution genomic polymorphism data is important for personalized medicine in humans, plant and animal breeding, and adaptive evolution. However, this is difficult for populations of unrelated individuals when the number of causal variants is low relative to the total number of polymorphisms and causal variants individually have small ...

May 27 2016 27235308

Tracking medical genetic literature through machine learning.

There has been remarkable progress in identifying the causes of genetic conditions as well as understanding how changes in specific genes cause disease. Though difficult (and often superficial) to parse, an interesting tension involves emphasis on basic research aimed to dissect normal and abnormal biology versus more clearly clinical and therapeutic investigations. To examine one facet of this qu...

May 22 2016 27268407
Integrated Analysis of Expression Profile Based on Differentially Expressed Genes in Middle Cerebral Artery Occlusion Animal Models.

Stroke is one of the most common causes of death, only second to heart disease. Molecular investigations about stroke are in acute shortage nowadays. ...

May 20 2016 27213359
Prevalence of Factor V Leiden-G1691A and MTHFR-C677T Thrombosis Gene Modifier in Iron Deficiency Anemia: A Pathophysiological Effect in Indian Isolates.

Normal iron levels are required to prevent thrombocytosis by inhibiting thrombopoiesis. Thrombocytosis is usually associated with a mild iron deficien...

May 18 2016 28149021
A Guiding Evolutionary Algorithm with Greedy Strategy for Global Optimization Problems.

A Guiding Evolutionary Algorithm (GEA) with greedy strategy for global optimization problems is proposed. Inspired by Particle Swarm Optimization, the...

May 18 2016 27293421
Discovery and Optimization of Materials Using Evolutionary Approaches.

Materials science is undergoing a revolution, generating valuable new materials such as flexible solar panels, biomaterials and printable tissues, new...

May 12 2016 27171499
The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology.

In recent years, sequencing technologies have enabled the identification of a wide range of non-coding RNAs (ncRNAs). Unfortunately, annotation and in...

May 4 2016 27152146
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.

Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of t...

May 3 2016 27141961
Text mining for precision medicine: automating disease-mutation relationship extraction from biomedical literature.

OBJECTIVE: Identifying disease-mutation relationships is a significant challenge in the advancement of precision medicine. The aim of this work is to ...

Apr 27 2016 27121612
An Improved Genetic Fuzzy Logic Control Method to Reduce the Enlargement of Coal Floor Deformation in Shearer Memory Cutting Process.

In order to reduce the enlargement of coal floor deformation and the manual adjustment frequency of rocker arms, an improved approach through integrat...

Apr 27 2016 27217824
Comparison of Boiling and Robotics Automation Method in DNA Extraction for Metagenomic Sequencing of Human Oral Microbes.

The rapid improvement of next-generation sequencing performance now enables us to analyze huge sample sets with more than ten thousand specimens. Howe...

Apr 22 2016 27104353
g:Profiler-a web server for functional interpretation of gene lists (2016 update).

Functional enrichment analysis is a key step in interpreting gene lists discovered in diverse high-throughput experiments. g:Profiler studies flat and...

Apr 20 2016 27098042
Identifying targets of selection in mosaic genomes with machine learning: applications in Anopheles gambiae for detecting sites within locally adapted chromosomal inversions.

Chromosomal inversions are important structural changes that may facilitate divergent selection when they capture co-adaptive loci in the face of gene...

Apr 20 2016 26994406
DanQ: a hybrid convolutional and recurrent deep neural network for quantifying the function of DNA sequences.

Modeling the properties and functions of DNA sequences is an important, but challenging task in the broad field of genomics. This task is particularly...

Apr 15 2016 27084946
DiMeX: A Text Mining System for Mutation-Disease Association Extraction.

The number of published articles describing associations between mutations and diseases is increasing at a fast pace. There is a pressing need to gath...

Apr 13 2016 27073839
Extending gene ontology in the context of extracellular RNA and vesicle communication.

BACKGROUND: To address the lack of standard terminology to describe extracellular RNA (exRNA) data/metadata, we have launched an inter-community effor...

Apr 12 2016 27076901
G-Protein-Coupled Receptor 35 Mediates Human Saphenous Vein Vascular Smooth Muscle Cell Migration and Endothelial Cell Proliferation.

Vascular smooth muscle cell (VSMC) migration and proliferation is central to neointima formation in vein graft failure following coronary artery bypas...

Apr 12 2016 27064272
Classifying Force Spectroscopy of DNA Pulling Measurements Using Supervised and Unsupervised Machine Learning Methods.

Dynamic force spectroscopy (DFS) measurements on biomolecules typically require classifying thousands of repeated force spectra prior to data analysis...

Apr 4 2016 27010122
An Efficient Supervised Training Algorithm for Multilayer Spiking Neural Networks.

The spiking neural networks (SNNs) are the third generation of neural networks and perform remarkably well in cognitive tasks such as pattern recognit...

Apr 4 2016 27044001
Recombination spot identification Based on gapped k-mers.

Recombination is crucial for biological evolution, which provides many new combinations of genetic diversity. Accurate identification of recombination...

Mar 31 2016 27030570
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