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Using deep learning to improve genetic studies of osteoporosis

To evaluate how recent advances in deep learning can improve the construction of quantitative phenotypes for genome-wide association studies (GWAS), we focused on the context of osteoporosis and bone mineral density (BMD) measurements. We applied image classifiers and transformer models to three distinct tasks. First, we developed quantitative estimates of osteoporosis severity using bone X-ray im...

Individualized treatment effects of corticosteroids in IgA nephropathy

IgA nephropathy (IgAN) is a leading cause of kidney failure with diverse clinical presentations and treatment responses, particularly to corticosteroids, with conflicting evidence. Due to potentially severe side effects and heterogenous responses more individualized approaches are needed. We developed a causal machine learning framework for predicting individualized treatment effects of corticoste...

Development of Self-Assessment Tools for Osteoporosis among Postmenopausal Vietnamese Women: A Machine Learning Approach

Osteoporosis is a major health concern in Vietnam due to a rise in aging rates. However, cost-effective early screening tools tailored to the Vietname...

Large language models in radiologic numerical tasks: A thorough evaluation and error analysis

To investigate the performance of LLMs in radiology numerical tasks and perform a comprehensive error analysis. We defined six tasks: extracting 1-min...

Early Identification of High-Risk Individuals for Mortality after Lung Transplantation: A Retrospective Cohort Study with Topological Transformers

Lung transplantation remains the only definitive treatment for patients with end-stage respiratory failure; however, it is burdened by a substantial r...

Dynamic Lymphocyte Recovery Patterns Predict 90-Day Mortality in Sepsis: A Machine Learning-Enhanced Analysis of the MIMIC-IV Cohort

Sepsis-induced immunosuppression, characterized by lymphopenia, is associated with adverse outcomes. We aimed to identify distinct lymphocyte recovery...

Arachnoiditis: Leveraging crowdsourcing and AI in a cross-sectional study of 1,105 cases to improve identification, understanding, and treatment

Arachnoiditis, a painful and potentially disabling neurological condition, results from persistent inflammation of the spinal cord pia-arachnoid membr...

Precision Immunosuppression and Long-Term Kidney Transplant Outcomes: A Dual Survival Modeling Framework

Optimizing immunosuppressive therapy remains central to improving long-term outcomes after kidney transplantation. Both induction and maintenance ther...

Exploring the Mechanisms of Sanguinarine in the Treatment of Osteoporosis by Integrating Network Pharmacology Analysis and Deep Learning Technology.

BACKGROUND: Sanguinarine (SAN) has been reported to have antioxidant, antiinflammatory, and antimicrobial activities with potential for the treatment ...

Jan 1 2025 38385487
Establishment and Validation of the Novel Necroptosis-related Genes for Predicting Stemness and Immunity of Hepatocellular Carcinoma Machine-learning Algorithm.

BACKGROUND: Necroptosis, a recently identified mechanism of programmed cell death, exerts significant influence on various aspects of cancer biology, ...

Jan 1 2025 39641162
DeepTransformer: Node Classification Research of a Deep Graph Network on an Osteoporosis Graph based on GraphTransformer.

BACKGROUND: Osteoporosis (OP) is one of the most common diseases in the elderly population. It is mostly treated with medication, but drug research an...

Jan 1 2025 39651564
Diagnosis Osteoporosis Risk: Using Machine Learning Algorithms Among Fasa Adults Cohort Study (FACS).

INTRODUCTION: In Iran, the assessment of osteoporosis through tools like dual-energy X-ray absorptiometry poses significant challenges due to their hi...

Jan 1 2025 39760233
Bayesian-optimized deep learning for identifying essential genes of mitophagy and fostering therapies to combat drug resistance in human cancers.

Dysregulated mitophagy is essential for mitochondrial quality control within human cancers. However, identifying hub genes regulating mitophagy and de...

Jan 1 2025 39834330
An Intrinsically Explainable Approach to Detecting Vertebral Compression Fractures in CT Scans via Neurosymbolic Modeling

Vertebral compression fractures (VCFs) are a common and potentially serious consequence of osteoporosis. Yet, they often remain undiagnosed. Opportu...

Computer-Aided Osteoporosis Diagnosis Using Transfer Learning with Enhanced Features from Stacked Deep Learning Modules

Knee osteoporosis weakens the bone tissue in the knee joint, increasing fracture risk. Early detection through X-ray images enables timely intervent...

Osteoporosis Prediction from Hand X-ray Images Using Segmentation-for-Classification and Self-Supervised Learning

Osteoporosis is a widespread and chronic metabolic bone disease that often remains undiagnosed and untreated due to limited access to bone mineral d...

Incorporating Metabolic Information into LLMs for Anomaly Detection in Clinical Time-Series

Anomaly detection in clinical time-series holds significant potential in identifying suspicious patterns in different biological parameters. In this...

Identification of novel M2 macrophage-related molecule ATP6V1E1 and its biological role in hepatocellular carcinoma based on machine learning algorithms.

Hepatocellular carcinoma (HCC) remains the most prevalent form of primary liver cancer, characterized by late detection and suboptimal response to cur...

Sep 1 2024 39294741
Fracture risk prediction in postmenopausal women with traditional and machine learning models in a nationwide, prospective cohort study in Switzerland with validation in the UK Biobank.

Fracture prediction is essential in managing patients with osteoporosis and is an integral component of many fracture prevention guidelines. We aimed ...

Aug 21 2024 38836468
Vertebral compression fractures at abdominal CT: underdiagnosis, undertreatment, and evaluation of an AI algorithm.

Vertebral compression fractures (VCFs) are common and indicate a high future risk of additional osteoporotic fractures. However, many VCFs are unrepor...

Aug 21 2024 38900913
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