AI Medical Compendium Topic

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Data Curation

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Computational framework for fusing eye movements and spoken narratives for image annotation.

Journal of vision
Despite many recent advances in the field of computer vision, there remains a disconnect between how computers process images and how humans understand them. To begin to bridge this gap, we propose a framework that integrates human-elicited gaze and ...

Structured reviews for data and knowledge-driven research.

Database : the journal of biological databases and curation
UNLABELLED: Hypothesis generation is a critical step in research and a cornerstone in the rare disease field. Research is most efficient when those hypotheses are based on the entirety of knowledge known to date. Systematic review articles are common...

Artificial intelligence with multi-functional machine learning platform development for better healthcare and precision medicine.

Database : the journal of biological databases and curation
Precision medicine is one of the recent and powerful developments in medical care, which has the potential to improve the traditional symptom-driven practice of medicine, allowing earlier interventions using advanced diagnostics and tailoring better ...

Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase.

Database : the journal of biological databases and curation
Biological knowledgebases rely on expert biocuration of the research literature to maintain up-to-date collections of data organized in machine-readable form. To enter information into knowledgebases, curators need to follow three steps: (i) identify...

Doc2Hpo: a web application for efficient and accurate HPO concept curation.

Nucleic acids research
We present Doc2Hpo, an interactive web application that enables interactive and efficient phenotype concept curation from clinical text with automated concept normalization using the Human Phenotype Ontology (HPO). Users can edit the HPO concepts aut...

UniProt: a worldwide hub of protein knowledge.

Nucleic acids research
The UniProt Knowledgebase is a collection of sequences and annotations for over 120 million proteins across all branches of life. Detailed annotations extracted from the literature by expert curators have been collected for over half a million of the...

EWAS Atlas: a curated knowledgebase of epigenome-wide association studies.

Nucleic acids research
Epigenome-Wide Association Study (EWAS) has become increasingly significant in identifying the associations between epigenetic variations and different biological traits. In this study, we develop EWAS Atlas (http://bigd.big.ac.cn/ewas), a curated kn...

Evaluation of an automatic article selection method for timelier updates of the Comet Core Outcome Set database.

Database : the journal of biological databases and curation
Curated databases of scientific literature play an important role in helping researchers find relevant literature, but populating such databases is a labour intensive and time-consuming process. One such database is the freely accessible Comet Core O...

FoodBase corpus: a new resource of annotated food entities.

Database : the journal of biological databases and curation
The existence of annotated text corpora is essential for the development of public health services and tools based on natural language processing (NLP) and text mining. Recently organized biomedical NLP shared tasks have provided annotated corpora re...

CDEK: Clinical Drug Experience Knowledgebase.

Database : the journal of biological databases and curation
The Clinical Drug Experience Knowledgebase (CDEK) is a database and web platform of active pharmaceutical ingredients with evidence of clinical testing as well as the organizations involved in their research and development. CDEK was curated by disam...