AIMC Topic: Datasets as Topic

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Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning.

Genome biology
We present RBPNet, a novel deep learning method, which predicts CLIP-seq crosslink count distribution from RNA sequence at single-nucleotide resolution. By training on up to a million regions, RBPNet achieves high generalization on eCLIP, iCLIP and m...

Scientific discovery in the age of artificial intelligence.

Nature
Artificial intelligence (AI) is being increasingly integrated into scientific discovery to augment and accelerate research, helping scientists to generate hypotheses, design experiments, collect and interpret large datasets, and gain insights that mi...

Using machine learning to decode animal communication.

Science (New York, N.Y.)
New methods promise transformative insights and conservation benefits.

Large language models encode clinical knowledge.

Nature
Large language models (LLMs) have demonstrated impressive capabilities, but the bar for clinical applications is high. Attempts to assess the clinical knowledge of models typically rely on automated evaluations based on limited benchmarks. Here, to a...

A deep learning approach to estimate x-ray scatter in digital breast tomosynthesis: From phantom models to clinical applications.

Medical physics
BACKGROUND: Digital breast tomosynthesis (DBT) has gained popularity as breast imaging modality due to its pseudo-3D reconstruction and improved accuracy compared to digital mammography. However, DBT faces challenges in image quality and quantitative...

A Dataset Auditing Method for Collaboratively Trained Machine Learning Models.

IEEE transactions on medical imaging
Dataset auditing for machine learning (ML) models is a method to evaluate if a given dataset is used in training a model. In a Federated Learning setting where multiple institutions collaboratively train a model with their decentralized private datas...

Implementation of transfer learning for the segmentation of human mesenchymal stem cells-A validation study.

Tissue & cell
INTRODUCTION: Stem cell therapy has been gaining interest in the regeneration rather than repair of lost human tissues. However, the manual analysis of stem cells prior to implantation is a cumbersome task that can be automated to improve the efficie...

A Speech Recognition Method Based on Domain-Specific Datasets and Confidence Decision Networks.

Sensors (Basel, Switzerland)
This paper proposes a speech recognition method based on a domain-specific language speech network (DSL-Net) and a confidence decision network (CD-Net). The method involves automatically training a domain-specific dataset, using pre-trained model par...

Home monitoring with connected mobile devices for asthma attack prediction with machine learning.

Scientific data
Monitoring asthma is essential for self-management. However, traditional monitoring methods require high levels of active engagement, and some patients may find this tedious. Passive monitoring with mobile-health devices, especially when combined wit...

Transformer-based temporal sequence learners for arrhythmia classification.

Medical & biological engineering & computing
An electrocardiogram (ECG) plays a crucial role in identifying and classifying cardiac arrhythmia. Traditional methods employ handcrafted features, and more recently, deep learning methods use convolution and recursive structures to classify heart si...