AIMC Topic: Deep Learning

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Prediction of binding property of RNA-binding proteins using multi-sized filters and multi-modal deep convolutional neural network.

PloS one
RNA-binding proteins (RBPs) are important in gene expression regulations by post-transcriptional control of RNAs and immune system development and its function. Due to the help of sequencing technology, numerous RNA sequences are newly discovered wit...

Weakly Supervised Estimation of Shadow Confidence Maps in Fetal Ultrasound Imaging.

IEEE transactions on medical imaging
Detecting acoustic shadows in ultrasound images is important in many clinical and engineering applications. Real-time feedback of acoustic shadows can guide sonographers to a standardized diagnostic viewing plane with minimal artifacts and can provid...

Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound.

IEEE transactions on medical imaging
Automatic prostate segmentation in transrectal ultrasound (TRUS) images is of essential importance for image-guided prostate interventions and treatment planning. However, developing such automatic solutions remains very challenging due to the missin...

Coupling Molecular Dynamics and Deep Learning to Mine Protein Conformational Space.

Structure (London, England : 1993)
Flexibility is often a key determinant of protein function. To elucidate the link between their molecular structure and role in an organism, computational techniques such as molecular dynamics can be leveraged to characterize their conformational spa...

Classification of epileptic EEG recordings using signal transforms and convolutional neural networks.

Computers in biology and medicine
This paper describes the analysis of a deep neural network for the classification of epileptic EEG signals. The deep learning architecture is made up of two convolutional layers for feature extraction and three fully-connected layers for classificati...

Making Sense of Spatio-Temporal Preserving Representations for EEG-Based Human Intention Recognition.

IEEE transactions on cybernetics
Brain-computer interface (BCI) is a system empowering humans to communicate with or control the outside world with exclusively brain intentions. Electroencephalography (EEG)-based BCI is one of the promising solutions due to its convenient and portab...

Automatic localization of anatomical regions in medical ultrasound images of rheumatoid arthritis using deep learning.

Proceedings of the Institution of Mechanical Engineers. Part H, Journal of engineering in medicine
The pace of population aging is growing faster worldwide. The quality of life of the aging population is mostly affected by rheumatic diseases. With the increasing rate of rheumatoid arthritis in the aging population, technological advances in the fi...

Deep Learning for Real-time, Automatic, and Scanner-adapted Prostate (Zone) Segmentation of Transrectal Ultrasound, for Example, Magnetic Resonance Imaging-transrectal Ultrasound Fusion Prostate Biopsy.

European urology focus
BACKGROUND: Although recent advances in multiparametric magnetic resonance imaging (MRI) led to an increase in MRI-transrectal ultrasound (TRUS) fusion prostate biopsies, these are time consuming, laborious, and costly. Introduction of deep-learning ...

Augmentation of CBCT Reconstructed From Under-Sampled Projections Using Deep Learning.

IEEE transactions on medical imaging
Edges tend to be over-smoothed in total variation (TV) regularized under-sampled images. In this paper, symmetric residual convolutional neural network (SR-CNN), a deep learning based model, was proposed to enhance the sharpness of edges and detailed...