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Electronic Health Records

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Causal machine learning for predicting treatment outcomes.

Nature medicine
Causal machine learning (ML) offers flexible, data-driven methods for predicting treatment outcomes including efficacy and toxicity, thereby supporting the assessment and safety of drugs. A key benefit of causal ML is that it allows for estimating in...

Quality of Answers of Generative Large Language Models Versus Peer Users for Interpreting Laboratory Test Results for Lay Patients: Evaluation Study.

Journal of medical Internet research
BACKGROUND: Although patients have easy access to their electronic health records and laboratory test result data through patient portals, laboratory test results are often confusing and hard to understand. Many patients turn to web-based forums or q...

Natural language processing (NLP) to facilitate abstract review in medical research: the application of BioBERT to exploring the 20-year use of NLP in medical research.

Systematic reviews
BACKGROUND: Abstract review is a time and labor-consuming step in the systematic and scoping literature review in medicine. Text mining methods, typically natural language processing (NLP), may efficiently replace manual abstract screening. This stud...

Identifying social determinants of health from clinical narratives: A study of performance, documentation ratio, and potential bias.

Journal of biomedical informatics
OBJECTIVE: To develop a natural language processing (NLP) package to extract social determinants of health (SDoH) from clinical narratives, examine the bias among race and gender groups, test the generalizability of extracting SDoH for different dise...

Validation of a novel Artificial Pharmacology Intelligence (API) system for the management of patients with polypharmacy.

Research in social & administrative pharmacy : RSAP
OBJECTIVE: Medication management of patients with polypharmacy is highly complex. We aimed to validate a novel Artificial Pharmacology Intelligence (API) algorithm to optimize the medication review process in a comprehensive, personalized, and scalab...

Multistep validation of a post-ERCP pancreatitis prediction system integrating multimodal data: a multicenter study.

Gastrointestinal endoscopy
BACKGROUND AND AIMS: The impact of various categories of information on the prediction of post-ERCP pancreatitis (PEP) remains uncertain. We comprehensively investigated the risk factors associated with PEP by constructing and validating a model inco...

Machine Learning-Based Predictive Models for Patients with Venous Thromboembolism: A Systematic Review.

Thrombosis and haemostasis
BACKGROUND:  Venous thromboembolism (VTE) is a chronic disorder with a significant health and economic burden. Several VTE-specific clinical prediction models (CPMs) have been used to assist physicians in decision-making but have several limitations....

Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records.

IEEE transactions on neural networks and learning systems
Observational causal inference is useful for decision-making in medicine when randomized clinical trials (RCTs) are infeasible or nongeneralizable. However, traditional approaches do not always deliver unconfounded causal conclusions in practice. The...

Identifying signs and symptoms of urinary tract infection from emergency department clinical notes using large language models.

Academic emergency medicine : official journal of the Society for Academic Emergency Medicine
BACKGROUND: Natural language processing (NLP) tools including recently developed large language models (LLMs) have myriad potential applications in medical care and research, including the efficient labeling and classification of unstructured text su...

Classifying early infant feeding status from clinical notes using natural language processing and machine learning.

Scientific reports
The objective of this study is to develop and evaluate natural language processing (NLP) and machine learning models to predict infant feeding status from clinical notes in the Epic electronic health records system. The primary outcome was the classi...