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Knowledge Bases

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Non-redundant association rules between diseases and medications: an automated method for knowledge base construction.

BMC medical informatics and decision making
BACKGROUND: The widespread use of electronic health records (EHRs) has generated massive clinical data storage. Association rules mining is a feasible technique to convert this large amount of data into usable knowledge for clinical decision making, ...

Incorporating linguistic knowledge for learning distributed word representations.

PloS one
Combined with neural language models, distributed word representations achieve significant advantages in computational linguistics and text mining. Most existing models estimate distributed word vectors from large-scale data in an unsupervised fashio...

A knowledge-based algorithm for automatic detection of cephalometric landmarks on CBCT images.

International journal of computer assisted radiology and surgery
PURPOSE: Cone-beam computed tomography (CBCT) is now an established component for 3D evaluation and treatment planning of patients with severe malocclusion and craniofacial deformities. Precision landmark plotting on 3D images for cephalometric analy...

The Quebec rural emergency department project: a cross-sectional study of a potential two-pronged strategy in the knowledge transfer process.

PloS one
INTRODUCTION: Health services research generates useful knowledge. Promotion of implementation of this knowledge in medical practice is essential. Prior to initiation of a major study on rural emergency departments (EDs), we deployed two knowledge tr...

Using the Knowledge Base of Health Services Research to Redefine Health Care Systems.

Journal of general internal medicine
This Perspective discusses 12 key facts derived from 50 years of health services research and argues that this knowledge base can stimulate innovative thinking about how to make health care systems safer, more efficient, more cost effective, and more...

Collating the knowledge base for core outcome set development: developing and appraising the search strategy for a systematic review.

BMC medical research methodology
BACKGROUND: The COMET (Core Outcome Measures in Effectiveness Trials) Initiative is developing a publicly accessible online resource to collate the knowledge base for core outcome set development (COS) and the applied work from different health condi...

MorphoCol: An ontology-based knowledgebase for the characterisation of clinically significant bacterial colony morphologies.

Journal of biomedical informatics
BACKGROUND: One of the major concerns of the biomedical community is the increasing prevalence of antimicrobial resistant microorganisms. Recent findings show that the diversification of colony morphology may be indicative of the expression of virule...

Integrating biological knowledge based on functional annotations for biclustering of gene expression data.

Computer methods and programs in biomedicine
Gene expression data analysis is based on the assumption that co-expressed genes imply co-regulated genes. This assumption is being reformulated because the co-expression of a group of genes may be the result of an independent activation with respect...

HemOnc.org: A Collaborative Online Knowledge Platform for Oncology Professionals.

Journal of oncology practice
PURPOSE: Cancer care involves extensive knowledge about numerous chemotherapy drugs and chemotherapy regimens. This information is constantly evolving, and there has been no freely available, comprehensive, centralized repository of chemotherapy info...