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Microscopy

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Automated characterisation of microglia in ageing mice using image processing and supervised machine learning algorithms.

Scientific reports
The resident macrophages of the central nervous system, microglia, are becoming increasingly implicated as active participants in neuropathology and ageing. Their diverse and changeable morphology is tightly linked with functions they perform, enabli...

Testing Precision Limits of Neural Network-Based Quality Control Metrics in High-Throughput Digital Microscopy.

Pharmaceutical research
OBJECTIVE: Digital microscopy is used to monitor particulates such as protein aggregates within biopharmaceutical products. The images that result encode a wealth of information that is underutilized in pharmaceutical process monitoring. For example,...

High-accuracy, direct aberration determination using self-attention-armed deep convolutional neural networks.

Journal of microscopy
Optical microscopes have long been essential for many scientific disciplines. However, the resolution and contrast of such microscopic images are dramatically affected by aberrations. In this study, compacted with adaptive optics, we propose a machin...

DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics.

PLoS computational biology
Improvements in microscopy software and hardware have dramatically increased the pace of image acquisition, making analysis a major bottleneck in generating quantitative, single-cell data. Although tools for segmenting and tracking bacteria within ti...

Using deep learning to predict the outcome of live birth from more than 10,000 embryo data.

BMC pregnancy and childbirth
BACKGROUND: Recently, the combination of deep learning and time-lapse imaging provides an objective, standard and scientific solution for embryo selection. However, the reported studies were based on blastocyst formation or clinical pregnancy as the ...

Gender Identification and Classification of Flies Using Machine Learning Techniques.

Computational and mathematical methods in medicine
is an important genetic model organism used extensively in medical and biological studies. About 61% of known human genes have a recognizable match with the genetic code of Drosophila flies, and 50% of fly protein sequences have mammalian analogues....

Computational Intelligence Method for Detection of White Blood Cells Using Hybrid of Convolutional Deep Learning and SIFT.

Computational and mathematical methods in medicine
Infection diseases are among the top global issues with negative impacts on health, economy, and society as a whole. One of the most effective ways to detect these diseases is done by analysing the microscopic images of blood cells. Artificial intell...

Grade classification of human glioma using a convolutional neural network based on mid-infrared spectroscopy mapping.

Journal of biophotonics
This study proposes a convolutional neural network (CNN)-based computer-aided diagnosis (CAD) system for the grade classification of human glioma by using mid-infrared (MIR) spectroscopic mappings. Through data augmentation of pixels recombination, t...

A novel deep learning-based 3D cell segmentation framework for future image-based disease detection.

Scientific reports
Cell segmentation plays a crucial role in understanding, diagnosing, and treating diseases. Despite the recent success of deep learning-based cell segmentation methods, it remains challenging to accurately segment densely packed cells in 3D cell memb...

Quantifying the cell morphology and predicting biological behavior of signet ring cell carcinoma using deep learning.

Scientific reports
Signet ring cell carcinoma (SRCC) is a malignant tumor of the digestive system. This tumor has long been considered to be poorly differentiated and highly invasive because it has a higher rate of metastasis than well-differentiated adenocarcinoma. Bu...