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Artificial plant optimization algorithm to detect heart rate & presence of heart disease using machine learning.

Artificial intelligence in medicine
In today's world, cardiovascular diseases are prevalent becoming the leading cause of death; more than half of the cardiovascular diseases are due to Coronary Heart Disease (CHD) which generates the demand of predicting them timely so that people can...

Jointly Integrating VCF-Based Variants and OWL-Based Biomedical Ontologies in MongoDB.

IEEE/ACM transactions on computational biology and bioinformatics
The development of the next-generation sequencing (NGS) technologies has led to massive amounts of VCF (Variant Call Format) files, which have been the standard formats developed with 1000 Genomes Project. At the same time, with the widespread use of...

PyDSLRep: A domain-specific language for robotic simulation in V-Rep.

PloS one
Calculating forward and inverse kinematics for robotic agents is one of the most time-intensive tasks when controlling the robot movement in any environment. This calculation is then encoded to control the motors and validated in a simulator. The fee...

medExtractR: A targeted, customizable approach to medication extraction from electronic health records.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: We developed medExtractR, a natural language processing system to extract medication information from clinical notes. Using a targeted approach, medExtractR focuses on individual drugs to facilitate creation of medication-specific research...

Machine Learning and Perturbation Theory Machine Learning (PTML) in Medicinal Chemistry, Biotechnology, and Nanotechnology.

Current topics in medicinal chemistry
Recently, different authors have reported Perturbation Theory (PT) methods combined with machine learning (ML) to obtain PTML (PT + ML) models. They have applied PTML models to the study of different biological systems. Here we present one state-of-a...

Rapid 3D phenotypic analysis of neurons and organoids using data-driven cell segmentation-free machine learning.

PLoS computational biology
Phenotypic profiling of large three-dimensional microscopy data sets has not been widely adopted due to the challenges posed by cell segmentation and feature selection. The computational demands of automated processing further limit analysis of hard-...

Identification of pan-cancer Ras pathway activation with deep learning.

Briefings in bioinformatics
The identification of hidden responders is often an essential challenge in precision oncology. A recent attempt based on machine learning has been proposed for classifying aberrant pathway activity from multiomic cancer data. However, we note several...