AIMC Topic: Software

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PredIDR2: Improving accuracy of protein intrinsic disorder prediction by updating deep convolutional neural network and supplementing DisProt data.

International journal of biological macromolecules
Intrinsically disordered proteins (IDPs) or regions (IDRs) are widespread in proteomes, and involved in several important biological processes and implicated in many diseases. Many computational methods for IDR prediction are being developed to decre...

SeizyML: An Application for Semi-Automated Seizure Detection Using Interpretable Machine Learning Models.

Neuroinformatics
Despite the vast number of publications reporting seizures and the reliance of the field on accurate seizure detection, there is a lack of open-source software tools in the scientific community for automating seizure detection based on electrographic...

Artificial intelligence-driven 3D MRI of lumbosacral nerve root anomalies: accuracy, incidence, and clinical utility.

Neuroradiology
PURPOSE: Lumbosacral nerve root anomalies are relatively rare but can be a risk factor for intraoperative nerve injury. However, it is often difficult to evaluate them with preoperative imaging. We developed a software that automatically generates th...

Artificial intelligence-enabled lipid droplets quantification: Comparative analysis of NIS-elements Segment.ai and ZeroCostDL4Mic StarDist networks.

Methods (San Diego, Calif.)
Lipid droplets (LDs) are dynamic organelles that are present in almost all cell types, with a particularly high prevalence in adipocytes. The phenotype of LDs in these cells reflects their maturity, metabolic activity and function. Although LDs quant...

Measuring kidney stone volume - practical considerations and current evidence from the EAU endourology section.

Current opinion in urology
PURPOSE OF REVIEW: This narrative review provides an overview of the use, differences, and clinical impact of current methods for kidney stone volume assessment.

stDyer enables spatial domain clustering with dynamic graph embedding.

Genome biology
Spatially resolved transcriptomics (SRT) data provide critical insights into gene expression patterns within tissue contexts, necessitating effective methods for identifying spatial domains. We introduce stDyer, an end-to-end deep learning framework ...

Heligeom: A web resource to generate, analyze, and visualize filament architectures based on pairwise association geometries of biological macromolecules.

Journal of molecular biology
At the subcellular level, macromolecules self-assemble to form molecular machinery in which the assembly modes play critical roles: the structural integrity of cell walls that allows mechanical growth, the maintenance and repair of the genetic materi...

Accuracy of cephalometric landmark identification by artificial intelligence platform versus expert orthodontist in unilateral cleft palate patients: A retrospective study.

International orthodontics
OBJECTIVE: The primary aim of the study was to evaluate the accuracy of automated artificial intelligence (AI) cephalometric landmark identification in cleft patients and compare it to landmarks identified by an expert orthodontist. The secondary obj...

The development of an artificial intelligence auto-segmentation tool for 3D volumetric analysis of vestibular schwannomas.

Scientific reports
Linear and volumetric analysis are the typical methods to measure tumor size. 3D volumetric analysis has risen in popularity; however, this is very time and labor intensive limiting its implementation in clinical practice. This study aims to show tha...

Application of Artificial Intelligence Software to Identify Emotions of Lung Cancer Patients in Preoperative Health Education: A Cross-Sectional Study.

Journal of nursing scholarship : an official publication of Sigma Theta Tau International Honor Society of Nursing
AIM(S): To determine the correlation between preoperative health education and the emotions of lung cancer patients, artificial intelligence software was used.