AIMC Topic: Software

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Impact of artificial intelligence assistance on pulmonary nodule detection and localization in chest CT: a comparative study among radiologists of varying experience levels.

Scientific reports
The study aimed to evaluate the impact of AI assistance on pulmonary nodule detection rates among radiology residents and senior radiologists, along with assessing the effectiveness of two different commercialy available AI software systems in improv...

Wfold: A new method for predicting RNA secondary structure with deep learning.

Computers in biology and medicine
Precise estimations of RNA secondary structures have the potential to reveal the various roles that non-coding RNAs play in regulating cellular activity. However, the mainstay of traditional RNA secondary structure prediction methods relies on thermo...

Comparison of semi and fully automated artificial intelligence driven softwares and manual system for cephalometric analysis.

BMC medical informatics and decision making
BACKGROUND: Cephalometric analysis has been used as one of the main tools for orthodontic diagnosis and treatment planning. The analysis can be performed manually on acetate tracing sheets, digitally by manual selection of landmarks or by recently in...

HELP: A computational framework for labelling and predicting human common and context-specific essential genes.

PLoS computational biology
Machine learning-based approaches are particularly suitable for identifying essential genes as they allow the generation of predictive models trained on features from multi-source data. Gene essentiality is neither binary nor static but determined by...

SPOT: A machine learning model that predicts specific substrates for transport proteins.

PLoS biology
Transport proteins play a crucial role in cellular metabolism and are central to many aspects of molecular biology and medicine. Determining the function of transport proteins experimentally is challenging, as they become unstable when isolated from ...

Can deep learning-designed anterior tooth-borne crown fulfill morphologic, aesthetic, and functional criteria in clinical practice?

Journal of dentistry
OBJECTIVES: This study aimed to compare the design outcomes of anterior crowns generated using deep learning (DL)-based software with those fabricated by a technician using conventional dental computer-assisted design (CAD) software without DL suppor...

PROTA: A Robust Tool for Protamine Prediction Using a Hybrid Approach of Machine Learning and Deep Learning.

International journal of molecular sciences
Protamines play a critical role in DNA compaction and stabilization in sperm cells, significantly influencing male fertility and various biotechnological applications. Traditionally, identifying these proteins is a challenging and time-consuming proc...

Lazy Resampling: Fast and information preserving preprocessing for deep learning.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Preprocessing of data is a vital step for almost all deep learning workflows. In computer vision, manipulation of data intensity and spatial properties can improve network stability and can provide an important source of gen...

MolPipeline: A Python Package for Processing Molecules with RDKit in Scikit-learn.

Journal of chemical information and modeling
The open-source package scikit-learn provides various machine learning algorithms and data processing tools, including the Pipeline class, which allows users to prepend custom data transformation steps to the machine learning model. We introduce the ...