AIMC Topic: Stem Cells

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Predicting multipotency of human adult stem cells derived from various donors through deep learning.

Scientific reports
Adult stem cell-based therapeutic approaches have great potential in regenerative medicine because of their immunoregulatory properties and multidifferentiation capacity. Nevertheless, the outcomes of stem cell‑based therapies to date have shown inco...

Segmentation, Detection, and Tracking of Stem Cell Image by Digital Twins and Lightweight Deep Learning.

Computational intelligence and neuroscience
The current work aims to strengthen the research of segmentation, detection, and tracking methods of stem cell image in the fields of regenerative medicine and tissue damage restoration. Firstly, based on the relevant theories of stem cell image segm...

Multi-Path U-Net Architecture for Cell and Colony-Forming Unit Image Segmentation.

Sensors (Basel, Switzerland)
U-Net is the most cited and widely-used deep learning model for biomedical image segmentation. In this paper, we propose a new enhanced version of a ubiquitous U-Net architecture, which improves upon the original one in terms of generalization capabi...

Generative Adversarial Networks for Morphological-Temporal Classification of Stem Cell Images.

Sensors (Basel, Switzerland)
Frequently, neural network training involving biological images suffers from a lack of data, resulting in inefficient network learning. This issue stems from limitations in terms of time, resources, and difficulty in cellular experimentation and data...

Stem-cell based, machine learning approach for optimizing natural killer cell-based personalized immunotherapy for high-grade ovarian cancer.

The FEBS journal
Advanced high-grade serous ovarian cancer continues to be a therapeutic challenge for those affected using the current therapeutic interventions. There is an increasing interest in personalized cancer immunotherapy using activated natural killer (NK)...

Label-free quality control and identification of human keratinocyte stem cells by deep learning-based automated cell tracking.

Stem cells (Dayton, Ohio)
Stem cell-based products have clinical and industrial applications. Thus, there is a need to develop quality control methods to standardize stem cell manufacturing. Here, we report a deep learning-based automated cell tracking (DeepACT) technology fo...

Identification of stem cells from large cell populations with topological scoring.

Molecular omics
Machine learning and topological analysis methods are becoming increasingly used on various large-scale omics datasets. Modern high dimensional flow cytometry data sets share many features with other omics datasets like genomics and proteomics. For e...

Pathway-Based Single-Cell RNA-Seq Classification, Clustering, and Construction of Gene-Gene Interactions Networks Using Random Forests.

IEEE journal of biomedical and health informatics
Single-cell RNA-Sequencing (scRNA-Seq), an advanced sequencing technique, enables biomedical researchers to characterize cell-specific gene expression profiles. Although studies have adapted machine learning algorithms to cluster different cell popul...

Sequential Saliency Guided Deep Neural Network for Joint Mitosis Identification and Localization in Time-Lapse Phase Contrast Microscopy Images.

IEEE journal of biomedical and health informatics
The analysis of cell mitotic behavior plays important role in many biomedical research and medical diagnostic applications. To improve the accuracy of mitosis detection in automated analysis systems, this paper proposes the sequential saliency guided...

OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.

BMC bioinformatics
BACKGROUND: Stem cells and stem cell lines are widely used in biomedical research. The Cell Ontology (CL) and Cell Line Ontology (CLO) are two community-based OBO Foundry ontologies in the domains of in vivo cells and in vitro cell line cells, respec...