Infectious Disease

COVID-19

Latest AI and machine learning research in covid-19 for healthcare professionals.

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Accurate protein stability prediction for small domains using mega-scale experiments

Predicting absolute protein folding stability is a long-standing challenge in biophysics, with broad applications in protein design and in understanding genetic variation and evolution. Physics-based simulations have shown limited success at predicting stability and are often computationally intractable, and machine learning methods have been constrained by the lack of sufficiently large experimen...

CharacTERT: A machine learning tool for classifying hTERT missense variants

Missense mutations in TERT, the gene encoding the human telomerase catalytic subunit hTERT, are associated with Telomere Biology Disorders (TBDs). Experimentally elucidating the effects of all possible missense variants would be time-consuming and technically challenging. Moreover, current computational predictors are not hTERT-specific and primarily rely on sequence information, failing to captur...

Prediction of Transcription Factor DNA Binding Affinity with High-Throughput Kd Measurements and Deep Learning

Transcription factors (TFs) regulate gene expression through specific interactions with genomic DNA. While TF binding motifs from public databases des...

Comprehensive interaction profiling and machine learning prediction of bacteriophage infectivity across clinically diverse Pseudomonas aeruginosa

The rise of antibiotic-resistant bacterial infections has driven renewed interest in bacteriophage therapy, where viruses that specifically kill bacte...

Effects of Structural Reward Shaping on Biophysical Properties in RL-Trained Plasmid Generators

We compare the efficacy and distributional effects of supervised fine-tuning (SFT) and reinforcement learning (RL) post-training for PlasmidGPT, a fou...

Excitatory Dysfunction and Phenotypic Rescue in a Human Neuronal Model of SCN2A-Related Disorders

SCN2A-related disorders result from pathogenic variants in the gene encoding for the voltage-gated sodium channel Nav1.2. Collectively, these disorder...

Assessing the reliability of immunofluorescence image analysis with artificial intelligence

In view of the outstanding progress of machine learning (ML) and growing cost of health systems, it is a current challenge to incorporate artificial i...

Structure and Dynamics of the HIV-1 Envelope Protein on the Virion Envelope

HIV-1 buds from infected cells as immature virion particles with a scattered envelope glycoprotein (Env) distribution on their envelope. It then under...

Token-Space Mask Prediction for Efficient Vision Transformer Segmentation

Query-based Vision Transformer segmentation models typically reconstruct dense spatial feature maps to predict masks, inheriting design patterns from ...

May 18 2026 2605.18177v1
Learning Normal Representations for Blood Biomarkers

Blood-based biomarkers underpin clinical diagnosis and management, yet their interpretation relies largely on fixed population reference intervals tha...

May 18 2026 2605.18701v1
StyleText: A Large-Scale Dataset and Benchmark for Stylized Scene Text Inpainting

We present StyleText, a large-scale dataset and benchmark for localized scene-text inpainting with style preservation. StyleText contains 28,518 image...

May 17 2026 2605.17309v1
Error-Decomposed Class-Conditional Fusion for Statistically Guaranteed Hard-Category Robust Perception

Aggregate object detection metrics inherently mask catastrophic and repeatable failures in operationally critical, long-tail minority classes. This pa...

May 17 2026 2605.17591v1
A Longitudinal Clinical Foundation Model on Nationwide Veteran Health Trajectories

We present VA-LLM, a 1.62-billion-parameter autoregressive transformer pre-trained from scratch on 1.74 trillion tokens of clinical text spanning 22 y...

TogoMCP: Natural Language Querying of Life-Science Knowledge Graphs via Schema-Guided LLMs and the Model Context Protocol

Querying the RDF Portal knowledge graph maintained by DBCLS, which aggregates approximately 60 life-science databases, requires proficiency in both SP...

Evo 2 Predicts Cardiomyopathy-Associated Variants and Elucidates Their Underlying Mechanisms

Background: Although advances in next-generation sequencing have accelerated the identification of genetic variants in cardiomyopathy, interpreting va...

Deciphering conformational preferences of RNA in protein-RNA recognition

Conformational plasticity of RNAs plays important roles in recognizing RNA-binding proteins, and is often modulated by their binding partners. Here, w...

CN-RNN: a Deep Learning Framework for Copy Number Variation Detection with Exome Sequencing Data

Copy number variations (CNVs) are major structural genomic variants that contribute to a wide range of human diseases. Accurate detection of CNVs from...

Design of DNA Aptamers for Lyme disease Diagnosis Combining experimental and numerical approaches

Aptamers are single stranded DNA or RNA molecules selected for their high affinity and specificity to bind target molecules, similar to antibodies. Th...

Testing the mutation accumulation hypothesis in aging with AlphaGenome

The mutation accumulation (MA) hypothesis posits that somatic mutations progressively escape selection and degrade tissue function during aging. Direc...

AnnotX: An Edge-powered Laparoscopic Video Annotation Platform

Accurate and objective evaluation of surgical skill and performance is critical for advancing training and improving patient outcomes. Current assessm...

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