Infectious Disease

COVID-19

Latest AI and machine learning research in covid-19 for healthcare professionals.

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Ophiuchus-Ab: A Versatile Generative Foundation Model for Advanced Antibody-Based Immunotherapy

Antibodies exhibit extraordinary specificity and diversity in antigen recognition and have become a central class of therapeutics across a wide range of diseases. Despite this clinical success, antibody design remains fundamentally challenging. Antibody function emerges from intricate and highly coupled interactions between heavy and light chains, which complicate sequence-function relationships a...

VecSet-Edit: Unleashing Pre-trained LRM for Mesh Editing from Single Image

3D editing has emerged as a critical research area to provide users with flexible control over 3D assets. While current editing approaches predominantly focus on 3D Gaussian Splatting or multi-view images, the direct editing of 3D meshes remains underexplored. Prior attempts, such as VoxHammer, rely on voxel-based representations that suffer from limited resolution and necessitate labor-intensive ...

Feb 4 2026 2602.04349v1
When LLaVA Meets Objects: Token Composition for Vision-Language-Models

Current autoregressive Vision Language Models (VLMs) usually rely on a large number of visual tokens to represent images, resulting in a need for more...

Feb 4 2026 2602.04864v1
Single-cell Multiome Analysis of Chromatin State and Transcriptome in the Human Basal Ganglia

The basal ganglia play essential roles in motor control, emotion, learning and reward processing. Their dysfunction contributes to many neurological a...

Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study

Background: Gastrointestinal stromal tumor (GIST) is the most common gastrointestinal mesenchymal tumor, driven by tyrosine-protein kinase KIT and pla...

SLIM-Diff: Shared Latent Image-Mask Diffusion with Lp loss for Data-Scarce Epilepsy FLAIR MRI

Focal cortical dysplasia (FCD) lesions in epilepsy FLAIR MRI are subtle and scarce, making joint image--mask generative modeling prone to instability ...

Feb 3 2026 2602.03372v1
BIG-TB: A benchmark for evaluating prediction and interpretability of sequence-based machine learning using *Mycobacterium tuberculosis* genomes

Foundation models aim to learn useful representations of biological sequences. However, the applicability of these representations for a wide range of...

Lung Nodule Image Synthesis Driven by Two-Stage Generative Adversarial Networks

The limited sample size and insufficient diversity of lung nodule CT datasets severely restrict the performance and generalization ability of detectio...

Feb 2 2026 2602.02171v1
C-kNN-LSH: A Nearest-Neighbor Algorithm for Sequential Counterfactual Inference

Estimating causal effects from longitudinal trajectories is central to understanding the progression of complex conditions and optimizing clinical dec...

Feb 2 2026 2602.02371v1
Data Augmentation for High-Fidelity Generation of CAR-T/NK Immunological Synapse Images

Chimeric antigen receptor (CAR)-T and NK cell immunotherapies have transformed cancer treatment, and recent studies suggest that the quality of the CA...

Feb 1 2026 2602.00949v1
Tissue-to-Analysis Framework Enables Multiscale Mapping of the Architectural and Cellular Organization in the Human Dorsal Root Ganglion

Transcriptomic studies have helped us understand the dorsal root ganglia's cellular milieu, yet our knowledge of protein expression and spatial organi...

Integrating multi-omic QTLs and predictive models reveals regulatory architectures at immune-related GWAS loci in CD4+ T cells

Functional interpretation is essential for understanding how genetic variants contribute to complex traits. Here, we identified and characterized regu...

A systematic assessment of machine learning for structural variant filtering

Background: Accurate discrimination of true structural variants (SVs) from artifacts in long-read sequencing data remains a critical bottleneck. Numer...

A Unified Study of LoRA Variants: Taxonomy, Review, Codebase, and Empirical Evaluation

Low-Rank Adaptation (LoRA) is a fundamental parameter-efficient fine-tuning method that balances efficiency and performance in large-scale neural netw...

Jan 30 2026 2601.22708v1
Gene-centered representation of coding and regulatory variation enables outcome prediction

Integrating coding and regulatory variation into unified, interpretable representations remains a challenge in functional genomics. Current approaches...

De novo design of a safe and potent respiratory syncytial virus immuno-focusing antigen

Respiratory syncytial virus (RSV) remains the leading cause of severe respiratory infections in infants, the elderly, and the immunocompromised. Altho...

Can Local Learning Match Self-Supervised Backpropagation?

While end-to-end self-supervised learning with backpropagation (global BP-SSL) has become central for training modern AI systems, theories of local se...

Jan 29 2026 2601.21683v1
Machine Learning Method for Optimizing Coding Sequences in Mammalian Cells

Mammalian cell lines are the preferred hosts for producing commercially relevant therapeutic proteins such as antibodies, multispecifics, and cytokine...

SemBind: Binding Diffusion Watermarks to Semantics Against Black-Box Forgery Attacks

Latent-based watermarks, integrated into the generation process of latent diffusion models (LDMs), simplify detection and attribution of generated ima...

Jan 28 2026 2601.20310v1
Demystifying Prediction Powered Inference

Machine learning predictions are increasingly used to supplement incomplete or costly-to-measure outcomes in fields such as biomedical research, envir...

Jan 28 2026 2601.20819v1
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