Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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A novel transformer-based platform for the prediction and design of biosynthetic gene clusters for (un)natural products.

Biosynthetic gene clusters (BGCs), comprising sets of functionally related genes responsible for synthesizing complex natural products, are a rich source of bioactive compounds with pharmaceutical potential. Here, we present a transformer-based framework that models functional domains as linguistic units to capture and predict their positional relationships within genomes. Using a RoBERTa architec...

Feb 23 2026 41730013

Large language model and Gd-EOB-DTPA-enhanced MRI-based risk stratification system for postoperative hepatocellular carcinoma: a multicenter study.

OBJECTIVE: To develop and validate a Fully Automated Stratification System (FASS) integrating serum biomarkers, automated radiomic features, and large language model (LLM)-derived semantic features for prognostic prediction in patients with solitary hepatocellular carcinoma (HCC) after hepatic resection. MATERIALS AND METHODS: A total of 448 patients with solitary HCC from three centers were retro...

Feb 23 2026 41731093
Influence of sex differences among endoscopists in gastric cancer and precancerous condition detection rate during EGD in the artificial intelligence era: a retrospective study.

AIMS: This study investigated whether endoscopist sex is associated with the detection of gastric precancerous conditions and neoplasia during esophag...

Feb 23 2026 41731139
Integrating scRNA-seq and snRNA-seq with spatial transcriptomics to unlock the xylem puzzle.

BACKGROUND: Xylem development is a dynamic, continuous process fundamental to secondary growth in woody plants and to biomass accumulation on earth. W...

Feb 23 2026 41724975
Using machine learning to predict and analyze complex trait diseases: Lessons from a simple abstract model.

The ability to predict individual genetic susceptibility to a complex trait disease is a major challenge in modern medicine. One approach to addressin...

Feb 23 2026 41729933
Explainable machine learning framework for the molecular classification of triple negative breast cancer.

BACKGROUND AND OBJECTIVE: The difference in molecular characteristics of Triple negative breast cancer (TNBC) aids in distinguishing between its four ...

Feb 22 2026 41775141
Machine learning framework for passage-based quality control of Hanwoo muscle satellite cells for cultured meat.

Myogenic satellite cells from Hanwoo (Korean native cattle) are valuable for cultured meat and livestock biotechnology, serving as a primary cellular ...

Feb 21 2026 41819875
Het2Gene: a phenotype-driven model for gene prioritization by heterogeneous graph embedding.

Mendelian genetic diseases pose a significant global health burden. Early identification of causative genes is crucial for halting disease progression...

Feb 21 2026 41724063
Tumor cell villages define the co-dependency of tumor and microenvironment in liver cancer.

Spatial cellular context is crucial in shaping intratumor heterogeneity. However, understanding how each tumor establishes its unique spatial landscap...

Feb 21 2026 41723121
From machine learning to causal insight: a robust 12-gene signature to distinguish sepsis risk from systemic inflammatory response syndrome.

BACKGROUND: Sepsis, a life-threatening condition driven by a dysregulated host response, poses significant challenges for early diagnosis and early in...

Feb 21 2026 41723546
Emerging trends and converging evidence in tumor evolution: A comprehensive review.

BACKGROUND: Tumor evolution is a spatiotemporal dynamic process orchestrated by the interplay of genetic mutations, epigenetic reprogramming, and bidi...

Feb 20 2026 41747370
Optimal management of oligometastatic prostate cancer: current state and future directions.

PURPOSE: Oligometastatic prostate cancer (oligoPCa) represents a clinical state of limited metastatic spread in which metastasis-directed therapy (MDT...

Feb 20 2026 41920569
Immunotherapy in Triple-Negative Breast Cancer: From Molecular Mechanisms to Precision Medicine-Overcoming Resistance and Optimizing Clinical Outcomes.

Triple-negative breast cancer (TNBC) is the most violent type of breast cancer, in which estrogen receptors (ER), progesterone receptors (PR), and hum...

Feb 20 2026 41724338
Differentiating bipolar disorder and schizophrenia using sleep EEG power and coherence features: A machine learning approach based on polysomnography.

Differentiating between bipolar disorder (BD) and schizophrenia (SZ) is challenging due to overlapping clinical symptoms and shared genetic risks, res...

Feb 20 2026 41724396
Programmable DNA-Based Molecular Reservoir Biocomputing Network Circuits with Emerging Biomemristors for Solving Complex Nonlinear Problems.

Biomolecular reservoir computing, despite its potential for nontraditional information processing, encounters difficulties in realizing intricate nonl...

Feb 20 2026 41719269
A topological map of the genetic components of grapevine-Admixture meets SOMmelier machine learning.

Inferring the genetic structure at the subpopulation level is crucial for understanding the demographic histories that shape genetic diversity. Among ...

Feb 20 2026 41719346
Antimicrobial resistance gene diversity, prevalence, and mobility within four landfills.

Antibiotics in landfills create selection pressures on the microorganisms present, selecting for antibiotic resistance genes (ARGs) and antibiotic res...

Feb 20 2026 41719533
A Novel Relative Distance Protein Fingerprint Algorithm for Searching DNA Mimic Proteins.

DNA mimic proteins are relatively obscure control factors that resemble DNA by mimicking its negatively charged distribution. They achieve this using ...

Feb 20 2026 41719577
Identification of a Potential Biomarker PDGFRA for Endometriosis Based on Comprehensive Analysis of Multiple Omics Data.

Endometriosis (EMs) is a common chronic inflammatory gynecological disorder. But the exact pathogenetic mechanism of the disease is not clear, with so...

Feb 20 2026 41721175
SamplingDesign: RNA design via continuous optimization with coupled variables and Monte-Carlo sampling.

RNA design aims to find a sequence that can fold into a target secondary structure. It can create artificial RNA molecules for specific functions, wit...

Feb 20 2026 41714588
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