Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Showing 10401-10420 of 14,220 articles

Machine learning in predicting pathological complete response to neoadjuvant chemoradiotherapy in rectal cancer using MRI: a systematic review and meta-analysis.

OBJECTIVES: To evaluate the performance of machine learning models in predicting pathological complete response (pCR) to neoadjuvant chemoradiotherapy (nCRT) in patients with rectal cancer using magnetic resonance imaging.

Jun 18 2024 38730550

skandiver: a divergence-based analysis tool for identifying intercellular mobile genetic elements

Mobile genetic elements (MGEs) are as ubiquitous in nature as they are varied in type, ranging from viral insertions to transposons to incorporated plasmids. Horizontal transfer of MGEs across bacterial species may also pose a significant threat to global health due to their capability to harbour antibiotic resistance genes. However, despite cheap and rapid whole genome sequencing, the varied na...

NovoBench: Benchmarking Deep Learning-based De Novo Peptide Sequencing Methods in Proteomics

Tandem mass spectrometry has played a pivotal role in advancing proteomics, enabling the high-throughput analysis of protein composition in biologic...

Epidemic-induced local awareness behavior inferred from surveys and genetic sequence data

Behavior-disease models suggest that pandemics can be contained cost-effectively if individuals take preventive actions when disease prevalence rise...

Human-level molecular optimization driven by mol-gene evolution

De novo molecule generation allows the search for more drug-like hits across a vast chemical space. However, lead optimization is still required, an...

ALPHAGMUT: A Rationale-Guided Alpha Shape Graph Neural Network to Evaluate Mutation Effects

In silico methods evaluating the mutation effects of missense mutations are providing an important approach for understanding mutations in personal ...

[Artificial intelligence research advances in discrimination and diagnosis of pulmonary ground-glass nodules].

Lung cancer, which accounts for about 18% of all cancer-related deaths worldwide, has a dismal 5-year survival rate of less than 20%. Survival rates f...

Jun 12 2024 38858209
Enhanced Gene Selection in Single-Cell Genomics: Pre-Filtering Synergy and Reinforced Optimization

Recent advancements in single-cell genomics necessitate precision in gene panel selection to interpret complex biological data effectively. Those me...

Machine learning to optimize automated RH genotyping using whole-exome sequencing data.

Rh phenotype matching reduces but does not eliminate alloimmunization in patients with sickle cell disease (SCD) due to RH genetic diversity that is n...

Jun 11 2024 38522094
STimage-1K4M: A histopathology image-gene expression dataset for spatial transcriptomics

Recent advances in multi-modal algorithms have driven and been driven by the increasing availability of large image-text datasets, leading to signif...

[Identification of oxidative stress-related biomarkers in chronic rhinosinusitis with nasal polyps using WGCNA combined with machine learning algorithms].

To identify diagnostic markers related to oxidative stress in chronic rhinosinusitis with nasal polyps (CRSwNP) by analyzing transcriptome sequencing...

Jun 7 2024 38965846
A Game-Theoretic Approach to Privacy-Utility Tradeoff in Sharing Genomic Summary Statistics

The advent of online genomic data-sharing services has sought to enhance the accessibility of large genomic datasets by allowing queries about genet...

Comparing Robot Controller Optimization Methods on Evolvable Morphologies.

In this paper, we compare Bayesian Optimization, Differential Evolution, and an Evolution Strategy employed as a gait-learning algorithm in modular ro...

Jun 3 2024 37200212
Generative AI in glioma: Ensuring diversity in training image phenotypes to improve diagnostic performance for IDH mutation prediction.

BACKGROUND: This study evaluated whether generative artificial intelligence (AI)-based augmentation (GAA) can provide diverse and realistic imaging ph...

Jun 3 2024 38253989
Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data.

UNLABELLED: Tumor type guides clinical treatment decisions in cancer, but histology-based diagnosis remains challenging. Genomic alterations are highl...

Jun 3 2024 38416134
GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models

The Genomic Foundation Model (GFM) paradigm is expected to facilitate the extraction of generalizable representations from massive genomic data, the...

Spiking Neural Membrane Systems with Adaptive Synaptic Time Delay.

Spiking neural membrane systems (or spiking neural P systems, SNP systems) are a new type of computation model which have attracted the attention of p...

Jun 1 2024 38706265
ProkDBP: Toward more precise identification of prokaryotic DNA binding proteins.

Prokaryotic DNA binding proteins (DBPs) play pivotal roles in governing gene regulation, DNA replication, and various cellular functions. Accurate com...

Jun 1 2024 38747369
Image-based recognition of parasitoid wasps using advanced neural networks.

Hymenoptera has some of the highest diversity and number of individuals among insects. Many of these species potentially play key roles as food source...

Jun 1 2024 38838190
Machine learning-based identification of a cell death-related signature associated with prognosis and immune infiltration in glioma.

Accumulating evidence suggests that a wide variety of cell deaths are deeply involved in cancer immunity. However, their roles in glioma have not been...

Jun 1 2024 38847472
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