Infectious Disease

HIV/AIDS

Latest AI and machine learning research in hiv/aids for healthcare professionals.

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Showing 1281-1300 of 4,657 articles

Discovery of a Hematopoietic Manifold in scGPT Yields a Method for Extracting Performant Algorithms from Biological Foundation Model Internals

We report the discovery and extraction of a compact hematopoietic algorithm from the single-cell foundation model scGPT, to our knowledge the first biologically useful, competitive algorithm extracted from a foundation model via mechanistic interpretability. We show that scGPT internally encodes a compact hematopoietic manifold with significant developmental branch structure, validated on a strict...

Mar 10 2026 2603.10261v1

A Rule-Based Machine Learning Model for Predicting Virological Failure Among Children Living With HIV in Malawi

Malawi's HIV treatment monitoring system faces serious challenges because of a shortage of experts and reliance on viral load testing every 3 to 12 months. The process causes dangerous delays in identifying treatment failure. This leads to a higher risk of disease progression, transmission, and death. To tackle this issue, this study used a machine learning model based on association rules and com...

Machine Learning for analysis of Multiple Sclerosis cross-tissue bulk and single-cell transcriptomics data

Multiple Sclerosis (MS) is a chronic autoimmune disease of the central nervous system whose molecular mechanisms remain incompletely understood. In th...

Mar 5 2026 2603.05572v1
SurvHTE-Bench: A Benchmark for Heterogeneous Treatment Effect Estimation in Survival Analysis

Estimating heterogeneous treatment effects (HTEs) from right-censored survival data is critical in high-stakes applications such as precision medicine...

Mar 5 2026 2603.05483v1
A spatial multi-omic portrait of survival outcome for clear cell renal cell carcinoma

Clear cell renal cell carcinoma (ccRCC) is the leading cause of kidney cancer-related death, but how the tumor microenvironment shapes patient surviva...

Optimal trajectory-guided stochastic co-optimization for e-fuel system design and real-time operation

E-fuels are promising long-term energy carriers supporting the net-zero transition. However, the large combinatorial design-operation spaces under ren...

Mar 3 2026 2603.03484v1
Improved prediction of virus-human protein-protein interactions by incorporating network topology and viral molecular mimicry

The protein-protein interactions (PPIs) between viruses and human play crucial roles in viral infections. Although numerous computational approaches h...

Transforming Histology into Virtual Multiplex Immunofluorescence to Decode Prognostic Spatial Immunity in Hepatocellular Carcinoma

The spatial organization of the tumor immune microenvironment (TIME) drives hepatocellular carcinoma (HCC) prognosis but remains unquantifiable on rou...

Redefining the Down-Sampling Scheme of U-Net for Precision Biomedical Image Segmentation

U-Net architectures have been instrumental in advancing biomedical image segmentation (BIS) but often struggle with capturing long-range information. ...

Feb 23 2026 2602.19412v1
Cold-Start Personalization via Training-Free Priors from Structured World Models

Cold-start personalization requires inferring user preferences through interaction when no user-specific historical data is available. The core challe...

Feb 16 2026 2602.15012v1
Multiplexed high-content imaging uncovers morphological diversity of lymphocyte activation and dysfunction

Single-cell transcriptomic and proteomic technologies enable molecular profiling of immune cells at scale but provide limited access to cellular pheno...

Designing AI-programmable therapeutics with the EDEN family of foundation models

The ability to interpret, modify, and design DNA has driven many of the most significant advances in modern medicine, from diagnostics, biologics, and...

Optimal hearing aid design through restoration of the neural code

Hearing loss introduces complex distortions in the neural coding of sound that current hearing aids fail to address. Here, we leverage tools for neura...

Auto-Comp: An Automated Pipeline for Scalable Compositional Probing of Contrastive Vision-Language Models

Modern Vision-Language Models (VLMs) exhibit a critical flaw in compositional reasoning, often confusing "a red cube and a blue sphere" with "a blue c...

Feb 2 2026 2602.02043v1
Integrating multi-omic QTLs and predictive models reveals regulatory architectures at immune-related GWAS loci in CD4+ T cells

Functional interpretation is essential for understanding how genetic variants contribute to complex traits. Here, we identified and characterized regu...

Diachronic Stereo Matching for Multi-Date Satellite Imagery

Recent advances in image-based satellite 3D reconstruction have progressed along two complementary directions. On one hand, multi-date approaches usin...

Jan 30 2026 2601.22808v1
Persistent Proxy Discrimination in HIV Testing Prediction Models: A National Fairness Audit of 386,775 US Adults

Background: Human immunodeficiency virus (HIV) disproportionately affects marginalized communities in the United States, with Black Americans comprisi...

Deep Learning-Based Spatial Immunoprofiling of Multiplex Immunofluorescence Images Distinguishes Tuberculosis Disease States in Diversity Outbred Mice

Tuberculosis (TB), caused by Mycobacterium tuberculosis (M.tb), remains a major global health challenge, with approximately 10.8 million new cases and...

Boundary and Position Information Mining for Aerial Small Object Detection

Unmanned Aerial Vehicle (UAV) applications have become increasingly prevalent in aerial photography and object recognition. However, there are major c...

Jan 23 2026 2601.16617v1
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