AIMC Topic: Deep Learning

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Deep EHR Spotlight: a Framework and Mechanism to Highlight Events in Electronic Health Records for Explainable Predictions.

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
The wide adoption of Electronic Health Records (EHR) has resulted in large amounts of clinical data becoming available, which promises to support service delivery and advance clinical and informatics research. Deep learning techniques have demonstrat...

Extracting Adverse Drug Events from Clinical Notes.

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
Adverse drug events (ADEs) are unexpected incidents caused by the administration of a drug or medication. To identify and extract these events, we require information about not just the drug itself but attributes describing the drug (e.g., strength, ...

Integration of NLP2FHIR Representation with Deep Learning Models for EHR Phenotyping: A Pilot Study on Obesity Datasets.

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
HL7 Fast Healthcare Interoperability Resources (FHIR) is one of the current data standards for enabling electronic healthcare information exchange. Previous studies have shown that FHIR is capable of modeling both structured and unstructured data fro...

Quantification of BERT Diagnosis Generalizability Across Medical Specialties Using Semantic Dataset Distance.

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
Deep learning models in healthcare may fail to generalize on data from unseen corpora. Additionally, no quantitative metric exists to tell how existing models will perform on new data. Previous studies demonstrated that NLP models of medical notes ge...

LCC-Net: A Lightweight Cross-Consistency Network for Semisupervised Cardiac MR Image Segmentation.

Computational and mathematical methods in medicine
Semantic segmentation plays a crucial role in cardiac magnetic resonance (MR) image analysis. Although supervised deep learning methods have made significant performance improvements, they highly rely on a large amount of pixel-wise annotated data, w...

Differential diagnosis of benign and malignant vertebral fracture on CT using deep learning.

European radiology
OBJECTIVES: To evaluate the performance of deep learning using ResNet50 in differentiation of benign and malignant vertebral fracture on CT.

Identification of voxel-based texture abnormalities as new biomarkers for schizophrenia and major depressive patients using layer-wise relevance propagation on deep learning decisions.

Psychiatry research. Neuroimaging
Non-segmented MRI brain images are used for the identification of new Magnetic Resonance Imaging (MRI) biomarkers able to differentiate between schizophrenic patients (SCZ), major depressive patients (MD) and healthy controls (HC). Brain texture meas...

Deep learning for automatic segmentation of the nuclear envelope in electron microscopy data, trained with volunteer segmentations.

Traffic (Copenhagen, Denmark)
Advancements in volume electron microscopy mean it is now possible to generate thousands of serial images at nanometre resolution overnight, yet the gold standard approach for data analysis remains manual segmentation by an expert microscopist, resul...

Automated delineation of orbital abscess depicted on CT scan using deep learning.

Medical physics
OBJECTIVES: To develop and validate a deep learning algorithm to automatically detect and segment an orbital abscess depicted on computed tomography (CT).

Detection of oedema on optical coherence tomography images using deep learning model trained on noisy clinical data.

Acta ophthalmologica
PURPOSE: To meet the demands imposed by the continuing growth of the Age-related macular degeneration (AMD) patient population, automation of follow-ups by detecting retinal oedema using deep learning might be a viable approach. However, preparing an...