AIMC Topic: Drug-Related Side Effects and Adverse Reactions

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Knowledge-guided convolutional networks for chemical-disease relation extraction.

BMC bioinformatics
BACKGROUND: Automatic extraction of chemical-disease relations (CDR) from unstructured text is of essential importance for disease treatment and drug development. Meanwhile, biomedical experts have built many highly-structured knowledge bases (KBs), ...

Smoothing dense spaces for improved relation extraction between drugs and adverse reactions.

International journal of medical informatics
BACKGROUND AND OBJECTIVE: This work aims at extracting Adverse Drug Reactions (ADRs), i.e. a harm directly caused by a drug at normal doses, from Electronic Health Records (EHRs). The lack of readily available EHRs because of confidentiality issues a...

An adverse drug effect mentions extraction method based on weighted online recurrent extreme learning machine.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Automatic extraction of adverse drug effect (ADE) mentions from biomedical texts is a challenging research problem that has attracted significant attention from the pharmacovigilance and biomedical text mining communities. I...

Machine learning on adverse drug reactions for pharmacovigilance.

Drug discovery today
Machine learning, especially deep learning, has the predictive power to predict adverse drug reactions, repurpose drugs and perform precision medicine. We provide a background of machine learning and propose a potential high-performance deep learning...

Network-Based Assessment of Adverse Drug Reaction Risk in Polypharmacy Using High-Throughput Screening Data.

International journal of molecular sciences
The risk of adverse drug reactions increases in a polypharmacology setting. High-throughput drug screening with transcriptomics applied to human cells has shown that drugs have effects on several molecular pathways, and these affected pathways may be...

A classification framework for exploiting sparse multi-variate temporal features with application to adverse drug event detection in medical records.

BMC medical informatics and decision making
BACKGROUND: Adverse drug events (ADEs) as well as other preventable adverse events in the hospital setting incur a yearly monetary cost of approximately $3.5 billion, in the United States alone. Therefore, it is of paramount importance to reduce the ...

eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates.

BMC pharmacology & toxicology
BACKGROUND: The efficiency of drug development defined as a number of successfully launched new pharmaceuticals normalized by financial investments has significantly declined. Nonetheless, recent advances in high-throughput experimental techniques an...

Predicting adverse drug reactions through interpretable deep learning framework.

BMC bioinformatics
BACKGROUND: Adverse drug reactions (ADRs) are unintended and harmful reactions caused by normal uses of drugs. Predicting and preventing ADRs in the early stage of the drug development pipeline can help to enhance drug safety and reduce financial cos...

Similarity-based machine learning support vector machine predictor of drug-drug interactions with improved accuracies.

Journal of clinical pharmacy and therapeutics
WHAT IS KNOWN AND OBJECTIVE: Drug-drug interactions (DDI) are frequent causes of adverse clinical drug reactions. Efforts have been directed at the early stage to achieve accurate identification of DDI for drug safety assessments, including the devel...

Innovation in Pharmacovigilance: Use of Artificial Intelligence in Adverse Event Case Processing.

Clinical pharmacology and therapeutics
Automation of pharmaceutical safety case processing represents a significant opportunity to affect the strongest cost driver for a company's overall pharmacovigilance budget. A pilot was undertaken to test the feasibility of using artificial intellig...