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Knowledge Bases

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The Research of Clinical Decision Support System Based on Three-Layer Knowledge Base Model.

Journal of healthcare engineering
In many clinical decision support systems, a two-layer knowledge base model (disease-symptom) of rule reasoning is used. This model often does not express knowledge very well since it simply infers disease from the presence of certain symptoms. In th...

Multi-model-based interactive authoring environment for creating shareable medical knowledge.

Computer methods and programs in biomedicine
OBJECTIVE: Technologically integrated healthcare environments can be realized if physicians are encouraged to use smart systems for the creation and sharing of knowledge used in clinical decision support systems (CDSS). While CDSSs are heading toward...

Knowledge base and mini-expert platform for the diagnosis of inborn errors of metabolism.

Genetics in medicine : official journal of the American College of Medical Genetics
PurposeRecognizing individuals with inherited diseases can be difficult because signs and symptoms often overlap those of common medical conditions. Focusing on inborn errors of metabolism (IEMs), we present a method that brings the knowledge of high...

Learning a Health Knowledge Graph from Electronic Medical Records.

Scientific reports
Demand for clinical decision support systems in medicine and self-diagnostic symptom checkers has substantially increased in recent years. Existing platforms rely on knowledge bases manually compiled through a labor-intensive process or automatically...

DES-TOMATO: A Knowledge Exploration System Focused On Tomato Species.

Scientific reports
Tomato is the most economically important horticultural crop used as a model to study plant biology and particularly fruit development. Knowledge obtained from tomato research initiated improvements in tomato and, being transferrable to other such ec...

Knowledge mapping visualization analysis of the military health and medicine papers published in the web of science over the past 10 years.

Military Medical Research
BACKGROUND: Military medicine is a research field that seeks to solve the medical problems that occur in modern war conditions based on public medicine theory.

Medical diagnosis as a linguistic game.

BMC medical informatics and decision making
BACKGROUND: We present a formalized medical knowledge system using a linguistic approach combined with a semantic net.

A knowledge-based T2-statistic to perform pathway analysis for quantitative proteomic data.

PLoS computational biology
Approaches to identify significant pathways from high-throughput quantitative data have been developed in recent years. Still, the analysis of proteomic data stays difficult because of limited sample size. This limitation also leads to the practice o...

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.

Nature biotechnology
We present 1,003 reference genomes that were sequenced as part of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence coverage of phylogenetic space. These genomes double the number of existing type strai...

Knowledge-based reconstruction for measurement of right ventricular volumes on cardiovascular magnetic resonance images in a mixed population.

Congenital heart disease
OBJECTIVE: Follow-up of right ventricular performance is important for patients with congenital heart disease. Cardiac magnetic resonance imaging is optimal for this purpose. However, observer-dependency of manual analysis of right ventricular volume...