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An artificial neural network-pharmacokinetic model and its interpretation using Shapley additive explanations.

CPT: pharmacometrics & systems pharmacology
We developed a method to apply artificial neural networks (ANNs) for predicting time-series pharmacokinetics (PKs), and an interpretable the ANN-PK model, which can explain the evidence of prediction by applying Shapley additive explanations (SHAP). ...

Structure-based protein function prediction using graph convolutional networks.

Nature communications
The rapid increase in the number of proteins in sequence databases and the diversity of their functions challenge computational approaches for automated function prediction. Here, we introduce DeepFRI, a Graph Convolutional Network for predicting pro...

Fin sweep angle does not determine flapping propulsive performance.

Journal of the Royal Society, Interface
The importance of the leading-edge sweep angle of propulsive surfaces used by unsteady swimming and flying animals has been an issue of debate for many years, spurring studies in biology, engineering, and robotics with mixed conclusions. In this work...

Translational Applications of Artificial Intelligence and Machine Learning for Diagnostic Pathology in Lymphoid Neoplasms: A Comprehensive and Evolutive Analysis.

Biomolecules
Genomic analysis and digitalization of medical records have led to a big data scenario within hematopathology. Artificial intelligence and machine learning tools are increasingly used to integrate clinical, histopathological, and genomic data in lymp...

Machine learning prediction of sleep stages in dairy cows from heart rate and muscle activity measures.

Scientific reports
Sleep is important for cow health and shows promise as a tool for assessing welfare, but methods to accurately distinguish between important sleep stages are difficult and impractical to use with cattle in typical farm environments. The objective of ...

Automatic segmentation of fish midlines for optimizing robot design.

Bioinspiration & biomimetics
While fish use continuous and flexible bodies to propel themselves, fish robots are often made from interconnected segments. How many segments do robots need to represent fish movements accurately? We propose a new method to automatically determine p...

Prediction of population behavior of Listeria monocytogenes in food using machine learning and a microbial growth and survival database.

Scientific reports
In predictive microbiology, statistical models are employed to predict bacterial population behavior in food using environmental factors such as temperature, pH, and water activity. As the amount and complexity of data increase, handling all data wit...

Direct Comparison of the Prediction of the Unbound Brain-to-Plasma Partitioning Utilizing Machine Learning Approach and Mechanistic Neuropharmacokinetic Model.

The AAPS journal
The mechanistic neuropharmacokinetic (neuroPK) model was established to predict unbound brain-to-plasma partitioning (K) by considering in vitro efflux activities of multiple drug resistance 1 (MDR1) and breast cancer resistance protein (BCRP). Herei...

Prediction of premature all-cause mortality in patients receiving peritoneal dialysis using modified artificial neural networks.

Aging
Premature all-cause mortality is high in patients receiving peritoneal dialysis (PD). The accurate and early prediction of mortality is critical and difficult. Three prediction models, the logistic regression (LR) model, artificial neural network (AN...