AIMC Topic: Natural Language Processing

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Automatically Expanding the Synonym Set of SNOMED CT using Wikipedia.

Studies in health technology and informatics
Clinical terminologies and ontologies are often used in natural language processing/understanding tasks as a method for semantically tagging text. One ontology commonly used for this task is SNOMED CT. Natural language is rich and varied: many differ...

Classifying the Indication for Colonoscopy Procedures: A Comparison of NLP Approaches in a Diverse National Healthcare System.

Studies in health technology and informatics
In order to measure the level of utilization of colonoscopy procedures, identifying the primary indication for the procedure is required. Colonoscopies may be utilized not only for screening, but also for diagnostic or therapeutic purposes. To determ...

Identification of Patients with Family History of Pancreatic Cancer--Investigation of an NLP System Portability.

Studies in health technology and informatics
In this study we have developed a rule-based natural language processing (NLP) system to identify patients with family history of pancreatic cancer. The algorithm was developed in a Unstructured Information Management Architecture (UIMA) framework an...

Classification of Contextual Use of Left Ventricular Ejection Fraction Assessments.

Studies in health technology and informatics
Knowledge of the left ventricular ejection fraction is critical for the optimal care of patients with heart failure. When a document contains multiple ejection fraction assessments, accurate classification of their contextual use is necessary to filt...

Generation of Natural-Language Textual Summaries from Longitudinal Clinical Records.

Studies in health technology and informatics
Physicians are required to interpret, abstract and present in free-text large amounts of clinical data in their daily tasks. This is especially true for chronic-disease domains, but holds also in other clinical domains. We have recently developed a p...

Identifying Repetitive Institutional Review Board Stipulations by Natural Language Processing and Network Analysis.

Studies in health technology and informatics
The corrections ("stipulations") to a proposed research study protocol produced by an institutional review board (IRB) can often be repetitive across many studies; however, there is no standard set of stipulations that could be used, for example, by ...

A Baseline Patient Model to Support Testing of Medical Cyber-Physical Systems.

Studies in health technology and informatics
Medical Cyber-Physical Systems (MCPS) are currently a trending topic of research. The main challenges are related to the integration and interoperability of connected medical devices, patient safety, physiologic closed-loop control, and the verificat...

InfoRoute: the CISMeF Context-specific Search Algorithm.

Studies in health technology and informatics
OBJECTIVE: The aim of this paper was to present a practical InfoRoute algorithm and applications developed by CISMeF to perform a contextual information retrieval across multiple medical websites in different health domains.

Assessing the Need of Discourse-Level Analysis in Identifying Evidence of Drug-Disease Relations in Scientific Literature.

Studies in health technology and informatics
Relation extraction typically involves the extraction of relations between two or more entities occurring within a single or multiple sentences. In this study, we investigated the significance of extracting information from multiple sentences specifi...

Recruit--An Ontology Based Information Retrieval System for Clinical Trials Recruitment.

Studies in health technology and informatics
Clinical trials are studies designed to assess whether a new intervention is better than the current alternatives. However, most of them fail to recruit participants on schedule. It is hard to use Electronic Health Record (EHR) data to find eligible ...