Infectious Disease

Bacterial Infection

Latest AI and machine learning research in bacterial infection for healthcare professionals.

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Machine Learning for Urinary Tract Infection Prediction in Emergency Departments: An Explainable Approach

Urinary tract infections (UTIs) represent a substantial burden in emergency department (ED) settings, where diagnostic delays and the limitations of traditional clinical assessments often result in suboptimal treatment decisions. This study develops an interpretable machine learning framework to enhance real-time UTI prediction accuracy. We analyzed a retrospective dataset of 80,387 ED patient enc...

Machine Learning-Driven Classification of Type 2 Diabetes Using Gut Microbiome Profiles for Enhanced Detection and Personalised Therapeutics

The purpose of the study is to investigate Type 2 Diabetes Mellitus (T2DM) progression and risk through investigating gut microbiome biomarkers, providing insights into disease status and potential synbiotic and fecal microbiota transplantation interventions. Gut dysbiosis serves as a key indicator for T2DM detection, supporting effective intervention strategies by outlining potential targets for ...

Multimodal deep learning model for prediction of prognosis in central nervous system inflammation.

Inflammatory diseases of the CNS impose a substantial disease burden, necessitating prompt and appropriate prognosis prediction. We developed a multim...

Jan 1 2025 40385378
A machine-learning approach for predicting butyrate production by microbial consortia using metabolic network information.

Understanding the behavior of microbial consortia is crucial for predicting metabolite production by microorganisms. Genome-scale network reconstructi...

Jan 1 2025 40452928
Integrating MALDI-TOF Mass Spectrometry with Machine Learning Techniques for Rapid Antimicrobial Resistance Screening of Foodborne Bacterial Pathogens.

Although MALDI-TOF mass spectrometry (MS) is considered as the gold standard for rapid and cost-effective identification of microorganisms in routine ...

Jan 1 2025 39235738
Using GWAS and Machine Learning to Identify and Predict Genetic Variants Associated with Foodborne Bacteria Phenotypic Traits.

One of the main challenges in food microbiology is to prevent the risk of outbreaks by avoiding the distribution of food contaminated by bacteria. Thi...

Jan 1 2025 39235748
Automated Evaluation of Antibiotic Prescribing Guideline Concordance in Pediatric Sinusitis Clinical Notes.

BACKGROUND: Ensuring antibiotics are prescribed only when necessary is crucial for maintaining their effectiveness and is a key focus of public health...

Jan 1 2025 39670367
Investigating the Impact of Antibiotics on Environmental Microbiota Through Machine Learning Models.

Antibiotic pollution in the environment can significantly impact soil microorganisms, such as altering the soil microbial community or emerging antibi...

Jan 1 2025 40150863
Pan-infection Foundation Framework Enables Multiple Pathogen Prediction

Host-response-based diagnostics can improve the accuracy of diagnosing bacterial and viral infections, thereby reducing inappropriate antibiotic pre...

A Fourfold Pathogen Reference Ontology Suite

Infectious diseases remain a critical global health challenge, and the integration of standardized ontologies plays a vital role in managing related...

Self-Calibrated Dual Contrasting for Annotation-Efficient Bacteria Raman Spectroscopy Clustering and Classification

Raman scattering is based on molecular vibration spectroscopy and provides a powerful technology for pathogenic bacteria diagnosis using the unique ...

Diagnosising Helicobacter pylori using AutoEncoders and Limited Annotations through Anomalous Staining Patterns in IHC Whole Slide Images

Purpose: This work addresses the detection of Helicobacter pylori (H. pylori) in histological images with immunohistochemical staining. This analysi...

Adversarial Contrastive Domain-Generative Learning for Bacteria Raman Spectrum Joint Denoising and Cross-Domain Identification

Raman spectroscopy, as a label-free detection technology, has been widely utilized in the clinical diagnosis of pathogenic bacteria. However, Raman ...

DiffRaman: A Conditional Latent Denoising Diffusion Probabilistic Model for Bacterial Raman Spectroscopy Identification Under Limited Data Conditions

Raman spectroscopy has attracted significant attention in various biochemical detection fields, especially in the rapid identification of pathogenic...

SAMP: Identifying antimicrobial peptides by an ensemble learning model based on proportionalized split amino acid composition.

It is projected that 10 million deaths could be attributed to drug-resistant bacteria infections in 2050. To address this concern, identifying new-gen...

Dec 6 2024 39573886
Deep learning revealed the distribution and evolution patterns for invertible promoters across bacterial lineages.

Invertible promoters (invertons) are crucial regulatory elements in bacteria, facilitating gene expression changes under stress. Despite their importa...

Nov 27 2024 39460615
Identifying Virulence Determinants In Pathogenic Mycobacteria Via Changes In Host Cell Mitochondrial Morphology

The goal of this study is to develop a computational model of the progression of changes in mitochondrial phenotype resulting from infection with pa...

Deep-Ace: LSTM-based Prokaryotic Lysine Acetylation Site Predictor

Acetylation of lysine residues (K-Ace) is a post-translation modification occurring in both prokaryotes and eukaryotes. It plays a crucial role in d...

Reinforcement Learning for Control of Non-Markovian Cellular Population Dynamics

Many organisms and cell types, from bacteria to cancer cells, exhibit a remarkable ability to adapt to fluctuating environments. Additionally, cells...

MyData: A Comprehensive Database of Mycetoma Tissue Microscopic Images for Histopathological Analysis

Mycetoma is a chronic and neglected inflammatory disease prevalent in tropical and subtropical regions. It can lead to severe disability and social ...

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