Genetics

Latest AI and machine learning research in genetics for healthcare professionals.

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Showing 2741-2760 of 14,214 articles

Digital CRISPR-based diagnostics for quantification of Candida auris and resistance mutations.

Candida auris, an increasingly prevalent fungal pathogen, requires both rapid identification and antifungal susceptibility testing to enable proper treatment. This study introduces digital SHERLOCK (dSHERLOCK), a platform that combines CRISPR/Cas nucleic acid detection, single-template quantification and real-time kinetics monitoring. Assays implemented on this platform display excellent sensitivi...

Jan 14 2026 41535388

IdentifiHR predicts homologous recombination deficiency in high-grade serous ovarian carcinoma using gene expression.

BACKGROUND: Approximately half of all high-grade serous ovarian carcinomas (HGSCs) have a therapeutically targetable defect in homologous recombination (HR) DNA repair. While there are genomic and transcriptomic methods, developed for other cancers, to identify HR deficient (HRD) samples, there are no gene expression-based tools to predict HR status in HGSC specifically. We have built a HGSC-speci...

Jan 14 2026 41535393
Ultra-high-throughput mapping of genetic design space.

Massively parallel genetic screens have been used to map sequence-to-function relationships for a variety of genetic elements1-5. However, as these ap...

Jan 14 2026 41535463
Integrating single-cell and bulk transcriptomes with machine learning reveals a CAF signature for immunotherapy response in dMMR endometrial cancer.

BACKGROUND: Cancer-associated fibroblasts (CAFs) are key players in the tumor microenvironment (TME), but their roles in prognosis and immunotherapy r...

Jan 14 2026 41535649
Disentangling direct and pleiotropic SNP effects in alfalfa (Medicago sativa L.) using causal graph learning.

Alfalfa (Medicago sativa L.) is a critical forage crop whose improvement depends on resolving the complex genetic architecture of agronomic traits. Wh...

Jan 14 2026 41535716
FSBLUP: a novel strategy of fusion similarity matrix construction via optimally integrating intermediate omics data to enhance genomic prediction.

The increasing availability of multi-omics data is promising in enhancing genomic prediction in breeding and human genetics. However, integrating mult...

Jan 14 2026 41535974
CADS: A Causal Inference Framework for Identifying Essential Genes to Enhance Drug Synergy Prediction.

MOTIVATION: Drug synergy is crucial for developing effective combination therapies, but traditional screening methods suffer from inefficiency and hig...

Jan 14 2026 41537237
Machine learning reveals sequence and methylation determinants of SaCas9-PAM interactions in bacteria.

Cas9 nucleases defend bacteria against invading DNA and can be used with single guide RNAs (sgRNAs) as antimicrobials and genome-editing tools. Howeve...

Jan 14 2026 41538317
Cutting-Edge AI Technologies in Skin Cancer Applications.

The rapid development of multimodal large language models (LLMs) such as GPT and Med-PaLM is reshaping medical practice. Skin cancer, one of the most ...

Jan 14 2026 41544780
Next-generation lung-cancer-on-a-chip: toward personalized therapy, AI, and CRISPR-driven models.

Lung-cancer-on-a-chip (LCOC) technologies have advanced rapidly, yet most models evaluate mechanical strain, patient-derived tumors, multi-organ inter...

Jan 14 2026 41544897
Dbert2_LR: A deep learning-based model for predicting cis-regulatory elements in crops.

Cis-regulatory elements (CREs) are key determinants of gene expression underlying complex agronomic traits. However, accurately identifying CREs in cr...

Jan 14 2026 41544987
Integrated Single Cell Spatial Analysis Reveals Dysregulated Basal Progenitor Cells in Ulcerative Colitis Pathogenesis: A Multi Omics Study.

BACKGROUND AND AIMS: Ulcerative colitis (UC), a chronic inflammatory bowel disease, causes persistent mucosal inflammation and epithelial dysfunction....

Jan 14 2026 41542331
Automated high-throughput microscopy screening unveiled new Listeria monocytogenes genes involved in cell infection.

To uncover novel genetic factors required for Listeria monocytogenes cell infection, we developed an automated high-throughput microscopy screening pi...

Jan 13 2026 41548381
NEIL1 suppresses ROS accumulation to promote temozolomide resistance and malignant progression in glioma cells.

BACKGROUND: Glioma is the most common malignant primary brain tumor. Temozolomide (TMZ) is the standard first-line chemotherapy, but its efficacy is s...

Jan 13 2026 41534309
Programmable Smart CAR-T design: A new paradigm in precision immunotherapy driven by logic gates, conditional activation, allogeneic strategies, and artificial intelligence.

Chimeric antigen receptor T-cell (CAR-T) therapy has achieved unprecedented success in hematological malignancies but faces formidable challenges in s...

Jan 13 2026 41539406
Identifying endoplasmic reticulum stress-related key genes of vascular dementia using bioinformatics and biological experiments.

Vascular dementia (VaD) is the second most common type of dementia, yet its pathogenesis is not fully understood, and effective diagnostic and therape...

Jan 13 2026 41548489
Cell type composition in bulk prostate cancer tissue is a prognostic biomarker.

Prostate cancer, among the most prevalent cancer types globally, exhibits marked heterogeneity and varying disease progression and clinical outcomes. ...

Jan 13 2026 41534468
Recent advances in the neurogenomics of autism spectrum disorder.

Neurogenomics has provided exceptional insights into the genetic architecture underlying autism spectrum disorder (ASD), which is increasingly underst...

Jan 13 2026 41534496
WRKY Transcription Factors: Integral Regulators of Defence Responses to Biotic Stress in Crops.

Crops are continually challenged by biotic stresses, including fungal, bacterial and viral pathogens and insect pests, which cause substantial yield a...

Jan 12 2026 41524271
Analysis and regulation of baijiu aroma-active compounds: integrating metabolomics, sensory genomics, and artificial intelligence.

Baijiu aroma is governed by a small number of odor-active compounds present at trace or ultra-trace levels, whose formation and perception are shaped ...

Jan 12 2026 41703838
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