AIMC Topic: Algorithms

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Validation of artificial intelligence algorithm LuxIA for screening of diabetic retinopathy from a single 45° retinal colour fundus images: the CARDS study.

BMJ open ophthalmology
OBJECTIVE: This study validated the artificial intelligence (AI)-based algorithm LuxIA for screening more-than-mild diabetic retinopathy (mtmDR) from a single 45° colour fundus image of patients with diabetes mellitus (DM, type 1 or type 2) in Spain....

Nonparametric IPSS: fast, flexible feature selection with false discovery control.

Bioinformatics (Oxford, England)
MOTIVATION: Feature selection is a critical task in machine learning and statistics. However, existing feature selection methods either (i) rely on parametric methods such as linear or generalized linear models, (ii) lack theoretical false discovery ...

An exploratory analysis of longitudinal artificial intelligence for cognitive fatigue detection using neurophysiological based biosignal data.

Scientific reports
Cognitive fatigue is a psychological condition characterized by opinions of fatigue and weakened cognitive functioning owing to constant stress. Cognitive fatigue is a critical condition that can significantly impair attention and performance, among ...

High-dimensional biomarker identification for interpretable disease prediction via machine learning models.

Bioinformatics (Oxford, England)
MOTIVATION: Omics features, often measured by high-throughput technologies, combined with clinical features, significantly impact the understanding of many complex human diseases. Integrating key omics biomarkers with clinical risk factors is essenti...

scMUSCL: multi-source transfer learning for clustering scRNA-seq data.

Bioinformatics (Oxford, England)
MOTIVATION: Single-cell RNA sequencing (scRNA-seq) analysis relies heavily on effective clustering to facilitate numerous downstream applications. Although several machine learning methods have been developed to enhance single-cell clustering, most a...

MVSF-AB: accurate antibody-antigen binding affinity prediction via multi-view sequence feature learning.

Bioinformatics (Oxford, England)
MOTIVATION: Predicting the binding affinity between antigens and antibodies accurately is crucial for assessing therapeutic antibody effectiveness and enhancing antibody engineering and vaccine design. Traditional machine learning methods have been w...

Detection of flap malperfusion after microsurgical tissue reconstruction using hyperspectral imaging and machine learning.

Scientific reports
Hyperspectral imaging (HSI) has shown significant diagnostic potential for both intra- and postoperative perfusion assessment. The purpose of this study was to combine machine learning and neural networks with HSI to develop a method for detecting fl...

Artificial intelligence-based automated matching of pulmonary nodules on follow-up chest CT.

European radiology experimental
BACKGROUND: The growing demand for follow-up imaging highlights the need for tools supporting the assessment of pulmonary nodules over time. We evaluated the performance of an artificial intelligence (AI)-based system for automated nodule matching.

Gated-GPS: enhancing protein-protein interaction site prediction with scalable learning and imbalance-aware optimization.

Briefings in bioinformatics
In protein-protein interaction site (PPIS) prediction, existing machine learning models struggle with small datasets, limiting their predictive accuracy for unseen proteins. Additionally, class imbalance in protein complexes, where binding residues c...

RLEAAI: improving antibody-antigen interaction prediction using protein language model and sequence order information.

Briefings in bioinformatics
Antibody-antigen interactions (AAIs) are a pervasive phenomenon in the natural and are instrumental in the design of antibody-based drugs. Despite the emergence of various deep learning-based methods aimed at enhancing the accuracy of AAIs prediction...