AIMC Topic: Cell Line, Tumor

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Hybrid chain reaction and selective recognition-based homogeneous dual-fluorescence analysis of circulating tumor cells in clinical ovarian cancer samples.

Analytica chimica acta
BACKGROUND: Oncological analysis is important in tumor diagnosis. We constructed a dual-fluorescence and binary visual analysis system for circulating tumor cells (CTCs) using the folate receptor as a biomarker, combined with hybridization chain reac...

Machine learning and biological evaluation-based identification of a potential MMP-9 inhibitor, effective against ovarian cancer cells SKOV3.

Journal of biomolecular structure & dynamics
MMP-9, also known as gelatinase B, is a zinc-metalloproteinase family protein that plays a key role in the degradation of the extracellular matrix (ECM). The normal function of MMP-9 includes the breakdown of ECM, a process that aids in normal physio...

A performance evaluation of drug response prediction models for individual drugs.

Scientific reports
Drug response prediction is important to establish personalized medicine for cancer therapy. Model construction for predicting drug response (i.e., cell viability half-maximal inhibitory concentration [IC]) of an individual drug by inputting pharmaco...

The prediction of drug sensitivity by multi-omics fusion reveals the heterogeneity of drug response in pan-cancer.

Computers in biology and medicine
Cancer drug response prediction based on genomic information plays a crucial role in modern pharmacogenomics, enabling individualized therapy. Given the expensive and complexity of biological experiments, computational methods serve as effective tool...

Efficient evaluation of photodynamic therapy on tumor based on deep learning.

Photodiagnosis and photodynamic therapy
Photodynamic therapy (PDT) is a non-invasive treatment method for treating tumors. Under laser irradiation, photosensitizers in tumor tissues generate biotoxic reactive oxygen, which can kill tumor cells. The traditional live/dead staining method of ...

Self-Propelled Janus Nanocatalytic Robots Guided by Magnetic Resonance Imaging for Enhanced Tumor Penetration and Therapy.

Journal of the American Chemical Society
Biomedical micro/nanorobots as active delivery systems with the features of self-propulsion and controllable navigation have made tremendous progress in disease therapy and diagnosis, detection, and biodetoxification. However, existing micro/nanorobo...

DeepCancerMap: A versatile deep learning platform for target- and cell-based anticancer drug discovery.

European journal of medicinal chemistry
Discovering new anticancer drugs has been widely concerned and remains an open challenge. Target- and phenotypic-based experimental screening represent two mainstream anticancer drug discovery methods, which suffer from time-consuming, labor-intensiv...

Automatic detection of circulating tumor cells and cancer associated fibroblasts using deep learning.

Scientific reports
Circulating tumor cells (CTCs) and cancer-associated fibroblasts (CAFs) from whole blood are emerging as important biomarkers that potentially aid in cancer diagnosis and prognosis. The microfilter technology provides an efficient capture platform fo...

Ensemble learning based assessment of the role of transcription factors in gene expression.

Computers in biology and medicine
Cancer cells are formed when the associated, active genes fail to function the way they are meant to function. Multiple genes collectively control cell growth by activating a proper set of genes. Regulation of gene expression is controlled through th...

DeepCAN: A Modular Deep Learning System for Automated Cell Counting and Viability Analysis.

IEEE journal of biomedical and health informatics
Precise and quick monitoring of key cytometric features such as cell count, size, morphology, and DNA content is crucial in life science applications. Traditionally, image cytometry relies on visual inspection of hemocytometers. This approach is erro...