Head and neck squamous carcinoma (HNSC), characterized by a high degree of malignancy, develops in close association with the tumor immune microenvironment (TIME). Therefore, identifying effective targets related to HNSC and TIME is of paramount impo...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Investigating the associations between circRNA and diseases is vital for comprehending the underlying mechanisms of diseases and formulating effective therapies. Computational prediction methods often rely solely on known circRNA-disease data, indire...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
MicroRNAs (miRNAs) play a significant role in cell differentiation, biological development as well as the occurrence and growth of diseases. Although many computational methods contribute to predicting the association between miRNAs and diseases, the...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Protein-protein interactions (PPIs) are essential to understanding cellular mechanisms, signaling networks, disease processes, and drug development, as they represent the physical contacts and functional associations between proteins. Recent advances...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Currently, biomedical event extraction has received considerable attention in various fields, including natural language processing, bioinformatics, and computational biomedicine. This has led to the emergence of numerous machine learning and deep le...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Generating high-quality and drug-like molecules from scratch within the expansive chemical space presents a significant challenge in the field of drug discovery. In prior research, value-based reinforcement learning algorithms have been employed to g...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Precisely predicting Drug-Drug Interactions (DDIs) carries the potential to elevate the quality and safety of drug therapies, protecting the well-being of patients, and providing essential guidance and decision support at every stage of the drug deve...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Recent advancements in spatially transcriptomics (ST) technologies have enabled the comprehensive measurement of gene expression profiles while preserving the spatial information of cells. Combining gene expression profiles and spatial information ha...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Drug Target Interaction (DTI) prediction plays a crucial role in in-silico drug discovery, especially for deep learning (DL) models. Along this line, existing methods usually first extract features from drugs and target proteins, and use drug-target ...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 10, 2024
Apple leaf diseases can seriously affect apple production and quality, and accurately detecting them can improve the efficiency of disease monitoring. Owing to the complex natural growth environment, apple leaf lesions may be easily confused with bac...