AIMC Topic: Deep Learning

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Artificial Intelligence in Hematology: Current Challenges and Opportunities.

Current hematologic malignancy reports
PURPOSE OF REVIEW: Artificial intelligence (AI), and in particular its subcategory machine learning, is finding an increasing number of applications in medicine, driven in large part by an abundance of data and powerful, accessible tools that have ma...

FUpred: detecting protein domains through deep-learning-based contact map prediction.

Bioinformatics (Oxford, England)
MOTIVATION: Protein domains are subunits that can fold and function independently. Correct domain boundary assignment is thus a critical step toward accurate protein structure and function analyses. There is, however, no efficient algorithm available...

Brewery: deep learning and deeper profiles for the prediction of 1D protein structure annotations.

Bioinformatics (Oxford, England)
MOTIVATION: Protein structural annotations (PSAs) are essential abstractions to deal with the prediction of protein structures. Many increasingly sophisticated PSAs have been devised in the last few decades. However, the need for annotations that are...

Redundancy-weighting the PDB for detailed secondary structure prediction using deep-learning models.

Bioinformatics (Oxford, England)
MOTIVATION: The Protein Data Bank (PDB), the ultimate source for data in structural biology, is inherently imbalanced. To alleviate biases, virtually all structural biology studies use nonredundant (NR) subsets of the PDB, which include only a fracti...

DL4papers: a deep learning approach for the automatic interpretation of scientific articles.

Bioinformatics (Oxford, England)
MOTIVATION: In precision medicine, next-generation sequencing and novel preclinical reports have led to an increasingly large amount of results, published in the scientific literature. However, identifying novel treatments or predicting a drug respon...

Predicting the Landscape of Recombination Using Deep Learning.

Molecular biology and evolution
Accurately inferring the genome-wide landscape of recombination rates in natural populations is a central aim in genomics, as patterns of linkage influence everything from genetic mapping to understanding evolutionary history. Here, we describe recom...

Lung Nodule Detection from Feature Engineering to Deep Learning in Thoracic CT Images: a Comprehensive Review.

Journal of digital imaging
This paper presents a systematic review of the literature focused on the lung nodule detection in chest computed tomography (CT) images. Manual detection of lung nodules by the radiologist is a sequential and time-consuming process. The detection is ...

Conventional Machine Learning and Deep Learning Approach for Multi-Classification of Breast Cancer Histopathology Images-a Comparative Insight.

Journal of digital imaging
Automatic multi-classification of breast cancer histopathological images has remained one of the top-priority research areas in the field of biomedical informatics, due to the great clinical significance of multi-classification in providing diagnosis...

Deep Learning and Transfer Learning for Optic Disc Laterality Detection: Implications for Machine Learning in Neuro-Ophthalmology.

Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society
BACKGROUND: Deep learning (DL) has demonstrated human expert levels of performance for medical image classification in a wide array of medical fields, including ophthalmology. In this article, we present the results of our DL system designed to deter...