AIMC Topic: Deep Learning

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Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation.

Nature cell biology
In the mammalian liver, hepatocytes exhibit diverse metabolic and functional profiles based on their location within the liver lobule. However, it is unclear whether this spatial variation, called zonation, is governed by a well-defined gene regulato...

Evaluation of accuracy of deep learning and conventional neural network algorithms in detection of dental implant type using intraoral radiographic images: A systematic review and meta-analysis.

The Journal of prosthetic dentistry
STATEMENT OF PROBLEM: With the growing importance of implant brand detection in clinical practice, the accuracy of machine learning algorithms in implant brand detection has become a subject of research interest. Recent studies have shown promising r...

Mining and rational design of psychrophilic catalases using metagenomics and deep learning models.

Applied microbiology and biotechnology
A complete catalase-encoding gene, designated soiCat1, was obtained from soil samples via metagenomic sequencing, assembly, and gene prediction. soiCat1 showed 73% identity to a catalase-encoding gene of Mucilaginibacter rubeus strain P1, and the ami...

Prediction of protein structure and AI.

Journal of human genetics
AlphaFold, an artificial intelligence (AI)-based tool for predicting the 3D structure of proteins, is now widely recognized for its high accuracy and versatility in the folding of human proteins. AlphaFold is useful for understanding structure-functi...

Real-Time Laryngeal Cancer Boundaries Delineation on White Light and Narrow-Band Imaging Laryngoscopy with Deep Learning.

The Laryngoscope
OBJECTIVE: To investigate the potential of deep learning for automatically delineating (segmenting) laryngeal cancer superficial extent on endoscopic images and videos.

BactInt: A domain driven transfer learning approach for extracting inter-bacterial associations from biomedical text.

Computational biology and chemistry
BACKGROUND: The healthy as well as dysbiotic state of an ecosystem like human body is known to be influenced not only by the presence of the bacterial groups in it, but also with respect to the associations within themselves. Evidence reported in bio...

A deep learning model based on MRI for prediction of vessels encapsulating tumour clusters and prognosis in hepatocellular carcinoma.

Abdominal radiology (New York)
PURPOSE: This study aimed to build and evaluate a deep learning (DL) model to predict vessels encapsulating tumor clusters (VETC) and prognosis preoperatively in patients with hepatocellular carcinoma (HCC).

Control list of high-priority chemicals based on 5-HT-RI functionality and the human health interference effects selective CNN-GRU deep learning model.

The Science of the total environment
The antidepressant drug known as 5-HT reuptake inhibitor (5-HT-RI) was commonly detected in biological tissues and result in significant adverse health effects. Homology modeling was used to characterize the functionalities (efficacy and resistance),...

DeBERTa-BiLSTM: A multi-label classification model of Arabic medical questions using pre-trained models and deep learning.

Computers in biology and medicine
It is wise to investigate past and present epidemics in the hopes of profiting from them and being better prepared for future ones. COVID-19 is one of the most recent and well-known pandemics; its effects are still felt today. Most or nearly all gove...

BPSegSys: A Brachial Plexus Nerve Trunk Segmentation System Using Deep Learning.

Ultrasound in medicine & biology
OBJECTIVE: Ultrasound-guided nerve block anesthesia (UGNB) is a high-tech visual nerve block anesthesia method that can be used to observe the target nerve and its surrounding structures, the puncture needle's advancement and local anesthetics spread...