AIMC Topic: Electronic Health Records

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Wikidata: A large-scale collaborative ontological medical database.

Journal of biomedical informatics
Created in October 2012, Wikidata is a large-scale, human-readable, machine-readable, multilingual, multidisciplinary, centralized, editable, structured, and linked knowledge-base with an increasing diversity of use cases. Here, we raise awareness of...

Adversarial training based lattice LSTM for Chinese clinical named entity recognition.

Journal of biomedical informatics
Clinical named entity recognition (CNER), which intends to automatically detect clinical entities in electronic health record (EHR), is a committed step for further clinical text mining. Recently, more and more deep learning models are used to Chines...

A two-stage deep learning approach for extracting entities and relationships from medical texts.

Journal of biomedical informatics
This work presents a two-stage deep learning system for Named Entity Recognition (NER) and Relation Extraction (RE) from medical texts. These tasks are a crucial step to many natural language understanding applications in the biomedical domain. Autom...

Chinese clinical named entity recognition with radical-level feature and self-attention mechanism.

Journal of biomedical informatics
Named entity recognition is a fundamental and crucial task in medical natural language processing problems. In medical fields, Chinese clinical named entity recognition identifies boundaries and types of medical entities from unstructured text such a...

Automated SNOMED CT concept and attribute relationship detection through a web-based implementation of cTAKES.

Journal of biomedical semantics
BACKGROUND: Information in Electronic Health Records is largely stored as unstructured free text. Natural language processing (NLP), or Medical Language Processing (MLP) in medicine, aims at extracting structured information from free text, and is le...

Ambient virtual scribes: Mutuo Health's AutoScribe as a case study of artificial intelligence-based technology.

Healthcare management forum
Studies show that clinicians are increasingly burning out in large part from the clerical burden associated with using Electronic Medical Record (EMR) systems. At the same time, recently developed health data analytic algorithms struggle with poor qu...

A validated natural language processing algorithm for brain imaging phenotypes from radiology reports in UK electronic health records.

BMC medical informatics and decision making
BACKGROUND: Manual coding of phenotypes in brain radiology reports is time consuming. We developed a natural language processing (NLP) algorithm to enable automatic identification of brain imaging in radiology reports performed in routine clinical pr...

Named entity recognition in electronic health records using transfer learning bootstrapped Neural Networks.

Neural networks : the official journal of the International Neural Network Society
Neural networks (NNs) have become the state of the art in many machine learning applications, such as image, sound (LeCun et al., 2015) and natural language processing (Young et al., 2017; Linggard et al., 2012). However, the success of NNs remains d...

Predicting the onset of type 2 diabetes using wide and deep learning with electronic health records.

Computer methods and programs in biomedicine
OBJECTIVE: Diabetes is responsible for considerable morbidity, healthcare utilisation and mortality in both developed and developing countries. Currently, methods of treating diabetes are inadequate and costly so prevention becomes an important step ...