AIMC Topic: Immune System

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Identification of gene and protein signatures associated with long-term effects of COVID-19 on the immune system after patient recovery by analyzing single-cell multi-omics data using a machine learning approach.

Vaccine
Viral infections significantly impact the immune system, and impact will persist until recovery. However, the influence of severe acute respiratory syndrome coronavirus 2 infection on the homeostatic immune status and secondary immune response in rec...

A guide to systems-level immunomics.

Nature immunology
The immune system is highly complex and distributed throughout an organism, with hundreds to thousands of cell states existing in parallel with diverse molecular pathways interacting in a highly dynamic and coordinated fashion. Although the character...

Machine Learning Approaches to TCR Repertoire Analysis.

Frontiers in immunology
Sparked by the development of genome sequencing technology, the quantity and quality of data handled in immunological research have been changing dramatically. Various data and database platforms are now driving the rapid progress of machine learning...

Opportunities and Challenges in Democratizing Immunology Datasets.

Frontiers in immunology
The field of immunology is rapidly progressing toward a systems-level understanding of immunity to tackle complex infectious diseases, autoimmune conditions, cancer, and beyond. In the last couple of decades, advancements in data acquisition techniqu...

Ontological model of multi-agent Smart-system for predicting drug properties based on modified algorithms of artificial immune systems.

Theoretical biology & medical modelling
BACKGROUND: Currently, due to the huge progress in the field of information technologies and computer equipment, it is important to use modern approaches of artificial intelligence in order to process extensive chemical information at creating new dr...

The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.

Scientific data
Machine learning has the potential to identify novel biological factors underlying successful antibody responses to influenza vaccines. The first attempts have revealed a high level of complexity in establishing influenza immunity, and many different...

Cellular frustration algorithms for anomaly detection applications.

PloS one
Cellular frustrated models have been developed to describe how the adaptive immune system works. They are composed by independent agents that continuously pair and unpair depending on the information that one sub-set of these agents display. The emer...

Reporting and connecting cell type names and gating definitions through ontologies.

BMC bioinformatics
BACKGROUND: Human immunology studies often rely on the isolation and quantification of cell populations from an input sample based on flow cytometry and related techniques. Such techniques classify cells into populations based on the detection of a p...

An Extreme Learning Machine Based on Artificial Immune System.

Computational intelligence and neuroscience
Extreme learning machine algorithm proposed in recent years has been widely used in many fields due to its fast training speed and good generalization performance. Unlike the traditional neural network, the ELM algorithm greatly improves the training...

A Novel Hybrid Clonal Selection Algorithm with Combinatorial Recombination and Modified Hypermutation Operators for Global Optimization.

Computational intelligence and neuroscience
Artificial immune system is one of the most recently introduced intelligence methods which was inspired by biological immune system. Most immune system inspired algorithms are based on the clonal selection principle, known as clonal selection algorit...