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Information Storage and Retrieval

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Content Based Image Retrieval by Using Color Descriptor and Discrete Wavelet Transform.

Journal of medical systems
Due to recent development in technology, the complexity of multimedia is significantly increased and the retrieval of similar multimedia content is a open research problem. Content-Based Image Retrieval (CBIR) is a process that provides a framework f...

Labeling for Big Data in radiation oncology: The Radiation Oncology Structures ontology.

PloS one
PURPOSE: Leveraging Electronic Health Records (EHR) and Oncology Information Systems (OIS) has great potential to generate hypotheses for cancer treatment, since they directly provide medical data on a large scale. In order to gather a significant am...

Harnessing electronic medical records to advance research on multiple sclerosis.

Multiple sclerosis (Houndmills, Basingstoke, England)
BACKGROUND: Electronic medical records (EMR) data are increasingly used in research, but no studies have yet evaluated similarity between EMR and research-quality data and between characteristics of an EMR multiple sclerosis (MS) population and known...

Information extraction from Italian medical reports: An ontology-driven approach.

International journal of medical informatics
OBJECTIVE: In this work, we propose an ontology-driven approach to identify events and their attributes from episodes of care included in medical reports written in Italian. For this language, shared resources for clinical information extraction are ...

Using semantics for representing experimental protocols.

Journal of biomedical semantics
BACKGROUND: An experimental protocol is a sequence of tasks and operations executed to perform experimental research in biological and biomedical areas, e.g. biology, genetics, immunology, neurosciences, virology. Protocols often include references t...

Endoscopic Image Classification and Retrieval using Clustered Convolutional Features.

Journal of medical systems
With the growing use of minimally invasive surgical procedures, endoscopic video archives are growing at a rapid pace. Efficient access to relevant content in such huge multimedia archives require compact and discriminative visual features for indexi...

Long short-term memory RNN for biomedical named entity recognition.

BMC bioinformatics
BACKGROUND: Biomedical named entity recognition(BNER) is a crucial initial step of information extraction in biomedical domain. The task is typically modeled as a sequence labeling problem. Various machine learning algorithms, such as Conditional Ran...

Music viewed by its entropy content: A novel window for comparative analysis.

PloS one
Polyphonic music files were analyzed using the set of symbols that produced the Minimal Entropy Description, which we call the Fundamental Scale. This allowed us to create a novel space to represent music pieces by developing: (a) a method to adjust ...

RAIN: A Bio-Inspired Communication and Data Storage Infrastructure.

Artificial life
We summarize the results and perspectives from a companion article, where we presented and evaluated an alternative architecture for data storage in distributed networks. We name the bio-inspired architecture RAIN, and it offers file storage service ...

Querying clinical data in HL7 RIM based relational model with morph-RDB.

Journal of biomedical semantics
BACKGROUND: Semantic interoperability is essential when carrying out post-genomic clinical trials where several institutions collaborate, since researchers and developers need to have an integrated view and access to heterogeneous data sources. One p...