AI Medical Compendium Topic

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Supervised Machine Learning

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Self-Supervised Learning for Feature Extraction from Glomerular Images and Disease Classification with Minimal Annotations.

Journal of the American Society of Nephrology : JASN
BACKGROUND: Deep learning has great potential in digital kidney pathology. However, its effectiveness depends heavily on the availability of extensively labeled datasets, which are often limited because of the specialized knowledge and time required ...

TransRM: Weakly supervised learning of translation-enhancing N6-methyladenosine (mA) in circular RNAs.

International journal of biological macromolecules
As our understanding of Circular RNAs (circRNAs) continues to expand, accumulating evidence has demonstrated that circRNAs can interact with microRNAs and RNA-binding proteins to modulate gene expression. More importantly, a subset of circRNAs has be...

Hyperspectral anomaly detection with self-supervised anomaly prior.

Neural networks : the official journal of the International Neural Network Society
Hyperspectral anomaly detection (HAD) can identify and locate the targets without any known information and is widely applied in Earth observation and military fields. The majority of existing HAD methods use the low-rank representation (LRR) model t...

Structural Similarity, Activity, and Toxicity of Mycotoxins: Combining Insights from Unsupervised and Supervised Machine Learning Algorithms.

Journal of agricultural and food chemistry
A large number of mycotoxins and related fungal metabolites have not been assessed in terms of their toxicological impacts. Current methodologies often prioritize specific target families, neglecting the complexity and presence of co-occurring compou...

Supervised and unsupervised deep learning-based approaches for studying DNA replication spatiotemporal dynamics.

Communications biology
In eukaryotic cells, DNA replication is organised both spatially and temporally, as evidenced by the stage-specific spatial distribution of replication foci in the nucleus. Despite the genetic association of aberrant DNA replication with numerous hum...

Learning Consistent Semantic Representation for Chest X-ray via Anatomical Localization in Self-Supervised Pre-Training.

IEEE journal of biomedical and health informatics
Despite the similar global structures in Chest X-ray (CXR) images, the same anatomy exhibits varying appearances across images, including differences in local textures, shapes, colors, etc. Learning consistent representations for anatomical semantics...

Masked Deformation Modeling for Volumetric Brain MRI Self-Supervised Pre-Training.

IEEE transactions on medical imaging
Self-supervised learning (SSL) has been proposed to alleviate neural networks' reliance on annotated data and to improve downstream tasks' performance, which has obtained substantial success in several volumetric medical image segmentation tasks. How...

ProCNS: Progressive Prototype Calibration and Noise Suppression for Weakly-Supervised Medical Image Segmentation.

IEEE journal of biomedical and health informatics
Weakly-supervised segmentation (WSS) has emerged as a solution to mitigate the conflict between annotation cost and model performance by adopting sparse annotation formats (e.g., point, scribble, block, etc.). Typical approaches attempt to exploit an...

HisynSeg: Weakly-Supervised Histopathological Image Segmentation via Image-Mixing Synthesis and Consistency Regularization.

IEEE transactions on medical imaging
Tissue semantic segmentation is one of the key tasks in computational pathology. To avoid the expensive and laborious acquisition of pixel-level annotations, a wide range of studies attempt to adopt the class activation map (CAM), a weakly-supervised...

Supervised Information Mining From Weakly Paired Images for Breast IHC Virtual Staining.

IEEE transactions on medical imaging
Immunohistochemistry (IHC) examination is essential to determine the tumour subtypes, provide key prognostic factors, and develop personalized treatment plans for breast cancer. However, compared to Hematoxylin and Eosin (H&E) staining, the preparati...