AIMC Topic: Support Vector Machine

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A cross-sectional evaluation of meditation experience on electroencephalography data by artificial neural network and support vector machine classifiers.

Medicine
To quantitate the meditation experience is a subjective and complex issue because it is confounded by many factors such as emotional state, method of meditation, and personal physical condition. In this study, we propose a strategy with a cross-secti...

Feature selection using a one dimensional naïve Bayes' classifier increases the accuracy of support vector machine classification of CDR3 repertoires.

Bioinformatics (Oxford, England)
MOTIVATION: Somatic DNA recombination, the hallmark of vertebrate adaptive immunity, has the potential to generate a vast diversity of antigen receptor sequences. How this diversity captures antigen specificity remains incompletely understood. In thi...

Protein subcellular localization prediction using multiple kernel learning based support vector machine.

Molecular bioSystems
Predicting the subcellular locations of proteins can provide useful hints that reveal their functions, increase our understanding of the mechanisms of some diseases, and finally aid in the development of novel drugs. As the number of newly discovered...

Prediction of acute toxicity of emerging contaminants on the water flea Daphnia magna by Ant Colony Optimization-Support Vector Machine QSTR models.

Environmental science. Processes & impacts
According to the European REACH Directive, the acute toxicity towards Daphnia magna should be assessed for any industrial chemical with a market volume of more than 1 t/a. Therefore, it is highly recommended to determine the toxicity at a certain con...

An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier.

Bioinformatics (Oxford, England)
MOTIVATION: Protein fold classification is a critical step in protein structure prediction. There are two possible ways to classify protein folds. One is through template-based fold assignment and the other is ab-initio prediction using machine learn...

CellSort: a support vector machine tool for optimizing fluorescence-activated cell sorting and reducing experimental effort.

Bioinformatics (Oxford, England)
MOTIVATION: High throughput screening by fluorescence activated cell sorting (FACS) is a common task in protein engineering and directed evolution. It can also be a rate-limiting step if high false positive or negative rates necessitate multiple roun...

RBPPred: predicting RNA-binding proteins from sequence using SVM.

Bioinformatics (Oxford, England)
MOTIVATION: Detection of RNA-binding proteins (RBPs) is essential since the RNA-binding proteins play critical roles in post-transcriptional regulation and have diverse roles in various biological processes. Moreover, identifying RBPs by computationa...

ESA-UbiSite: accurate prediction of human ubiquitination sites by identifying a set of effective negatives.

Bioinformatics (Oxford, England)
MOTIVATION: Numerous ubiquitination sites remain undiscovered because of the limitations of mass spectrometry-based methods. Existing prediction methods use randomly selected non-validated sites as non-ubiquitination sites to train ubiquitination sit...

Using recurrent neural network models for early detection of heart failure onset.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: We explored whether use of deep learning to model temporal relations among events in electronic health records (EHRs) would improve model performance in predicting initial diagnosis of heart failure (HF) compared to conventional methods th...

Reliable bearing fault diagnosis using Bayesian inference-based multi-class support vector machines.

The Journal of the Acoustical Society of America
This letter presents a multi-fault diagnosis scheme for bearings using hybrid features extracted from their acoustic emissions and a Bayesian inference-based one-against-all support vector machine (Bayesian OAASVM) for multi-class classification. The...