AIMC Topic: Animals

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Spike detection and sorting with deep learning.

Journal of neural engineering
OBJECTIVE: The extraction and identification of single-unit activities in intracortically recorded electric signals have a key role in basic neuroscience, but also in applied fields, like in the development of high-accuracy brain-computer interfaces....

Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks.

Scientific reports
Image-based automatic classification of vector mosquitoes has been investigated for decades for its practical applications such as early detection of potential mosquitoes-borne diseases. However, the classification accuracy of previous approaches has...

Next-generation drug repurposing using human genetics and network biology.

Current opinion in pharmacology
Drug repurposing has attracted increased attention, especially in the context of drug discovery rates that remain too low despite a recent wave of approvals for biological therapeutics (e.g. gene therapy). These new biological entities-based treatmen...

A Multi-Omics Interpretable Machine Learning Model Reveals Modes of Action of Small Molecules.

Scientific reports
High-throughput screening and gene signature analyses frequently identify lead therapeutic compounds with unknown modes of action (MoAs), and the resulting uncertainties can lead to the failure of clinical trials. We developed an approach for uncover...

A simple three layer excitatory-inhibitory neuronal network for temporal decision-making.

Behavioural brain research
Humans and animals do not only keep track of time intervals but they can also make decisions about durations. Temporal bisection is a psychophysical task that is widely used to assess the latter ability via categorization of durations as short or lon...

MMPdb and MitoPredictor: Tools for facilitating comparative analysis of animal mitochondrial proteomes.

Mitochondrion
Data on experimentally-characterized animal mitochondrial proteomes (mt-proteomes) are limited to a few model organisms and are scattered across multiple databases, impeding a comparative analysis. We developed two resources to address these problems...

Multiclass Classification of Hepatic Anomalies with Dielectric Properties: From Phantom Materials to Rat Hepatic Tissues.

Sensors (Basel, Switzerland)
Open-ended coaxial probes can be used as tissue characterization devices. However, the technique suffers from a high error rate. To improve this technology, there is a need to decrease the measurement error which is reported to be more than 30% for a...

A Method to Estimate Horse Speed per Stride from One IMU with a Machine Learning Method.

Sensors (Basel, Switzerland)
With the emergence of numerical sensors in sports, there is an increasing need for tools and methods to compute objective motion parameters with great accuracy. In particular, inertial measurement units are increasingly used in the clinical domain or...

A Dendritic Neuron Model with Adaptive Synapses Trained by Differential Evolution Algorithm.

Computational intelligence and neuroscience
A dendritic neuron model with adaptive synapses (DMASs) based on differential evolution (DE) algorithm training is proposed. According to the signal transmission order, a DNM can be divided into four parts: the synaptic layer, dendritic layer, membra...

Prediction of peptide binding to MHC using machine learning with sequence and structure-based feature sets.

Biochimica et biophysica acta. General subjects
Selecting peptides that bind strongly to the major histocompatibility complex (MHC) for inclusion in a vaccine has therapeutic potential for infections and tumors. Machine learning models trained on sequence data exist for peptide:MHC (p:MHC) binding...