AIMC Topic: Brain

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Representation learning of resting state fMRI with variational autoencoder.

NeuroImage
Resting state functional magnetic resonance imaging (rsfMRI) data exhibits complex but structured patterns. However, the underlying origins are unclear and entangled in rsfMRI data. Here we establish a variational auto-encoder, as a generative model ...

Deep learning for sex classification in resting-state and task functional brain networks from the UK Biobank.

NeuroImage
Classification of whole-brain functional connectivity MRI data with convolutional neural networks (CNNs) has shown promise, but the complexity of these models impedes understanding of which aspects of brain activity contribute to classification. Whil...

Deep Learning of Explainable EEG Patterns as Dynamic Spatiotemporal Clusters and Rules in a Brain-Inspired Spiking Neural Network.

Sensors (Basel, Switzerland)
The paper proposes a new method for deep learning and knowledge discovery in a brain-inspired Spiking Neural Networks (SNN) architecture that enhances the model's explainability while learning from streaming spatiotemporal brain data (STBD) in an inc...

B-Map: a fuzzy-based model to detect foreign objects in a brain.

Medical & biological engineering & computing
To cope up with the medical complications, scientists and physicians rely more on digitized historical evidence. It helps them to identify the disease and to develop new drugs and strategies. The authors have designed a model called B-Map. It can det...

MEGnet: Automatic ICA-based artifact removal for MEG using spatiotemporal convolutional neural networks.

NeuroImage
Magnetoencephalography (MEG) is a functional neuroimaging tool that records the magnetic fields induced by neuronal activity; however, signal from non-neuronal sources can corrupt the data. Eye-blinks, saccades, and cardiac activity are three of the ...

Accelerating quantitative susceptibility and R2* mapping using incoherent undersampling and deep neural network reconstruction.

NeuroImage
Quantitative susceptibility mapping (QSM) and R2* mapping are MRI post-processing methods that quantify tissue magnetic susceptibility and transverse relaxation rate distributions. However, QSM and R2* acquisitions are relatively slow, even with para...

Automatic classification of autism spectrum disorder in children using cortical thickness and support vector machine.

Brain and behavior
OBJECTIVE: Autism spectrum disorder (ASD) is a neurodevelopmental condition with a heterogeneous phenotype. The role of biomarkers in ASD diagnosis has been highlighted; cortical thickness has proved to be involved in the etiopathogenesis of ASD core...

Hahn-PCNN-CNN: an end-to-end multi-modal brain medical image fusion framework useful for clinical diagnosis.

BMC medical imaging
BACKGROUND: In medical diagnosis of brain, the role of multi-modal medical image fusion is becoming more prominent. Among them, there is no lack of filtering layered fusion and newly emerging deep learning algorithms. The former has a fast fusion spe...

Fast deep neural correspondence for tracking and identifying neurons in using semi-synthetic training.

eLife
We present an automated method to track and identify neurons in , called 'fast Deep Neural Correspondence' or fDNC, based on the transformer network architecture. The model is trained once on empirically derived semi-synthetic data and then predicts ...

Three-dimensional deep learning with spatial erasing for unsupervised anomaly segmentation in brain MRI.

International journal of computer assisted radiology and surgery
PURPOSE: Brain Magnetic Resonance Images (MRIs) are essential for the diagnosis of neurological diseases. Recently, deep learning methods for unsupervised anomaly detection (UAD) have been proposed for the analysis of brain MRI. These methods rely on...