Database : the journal of biological databases and curation
31697361
Curated databases of scientific literature play an important role in helping researchers find relevant literature, but populating such databases is a labour intensive and time-consuming process. One such database is the freely accessible Comet Core O...
Database : the journal of biological databases and curation
31682732
The existence of annotated text corpora is essential for the development of public health services and tools based on natural language processing (NLP) and text mining. Recently organized biomedical NLP shared tasks have provided annotated corpora re...
Database : the journal of biological databases and curation
31411687
The Clinical Drug Experience Knowledgebase (CDEK) is a database and web platform of active pharmaceutical ingredients with evidence of clinical testing as well as the organizations involved in their research and development. CDEK was curated by disam...
Significant progress has been made in applying deep learning on natural language processing tasks recently. However, deep learning models typically require a large amount of annotated training data while often only small labeled datasets are availabl...
This study investigated to what extent multimodal data can be used to detect mistakes during Cardiopulmonary Resuscitation (CPR) training. We complemented the Laerdal QCPR ResusciAnne manikin with the Multimodal Tutor for CPR, a multi-sensor system c...
BACKGROUND: Microbial genetics has formed a foundation for understanding many aspects of biology. Systematic annotation that supports computational data mining should reveal further insights for microbes, microbiomes, and conserved functions beyond m...
OBJECTIVE: The assessment of written medical examinations is a tedious and expensive process, requiring significant amounts of time from medical experts. Our objective was to develop a natural language processing (NLP) system that can expedite the as...
BMC medical informatics and decision making
31865903
BACKGROUND: Clinical Named Entity Recognition is to find the name of diseases, body parts and other related terms from the given text. Because Chinese language is quite different with English language, the machine cannot simply get the graphical and ...
Pharmacogenomics (PGx) studies how individual gene variations impact drug response phenotypes, which makes PGx-related knowledge a key component towards precision medicine. A significant part of the state-of-the-art knowledge in PGx is accumulated in...
IEEE/ACM transactions on computational biology and bioinformatics
31425122
With the rise of image-based transcriptomics, spatial gene expression data has become increasingly important for understanding gene regulations from the tissue level down to the cell level. Especially, the gene expression images of Drosophila embryos...